Factsheet for VIT_01s0026g01330.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g01340.t01	Wine grape	cytosol	82.33	82.33
Solyc05g006740.2.1	Tomato	cytosol	63.36	68.69
PGSC0003DMT400058271	Potato	cytosol	68.1	68.4
PGSC0003DMT400040670	Potato	cytosol	66.81	67.1
VIT_01s0026g01380.t01	Wine grape	endoplasmic reticulum	74.57	66.28
Solyc05g006730.2.1	Tomato	mitochondrion	63.79	65.78
VIT_19s0015g02560.t01	Wine grape	cytosol	27.59	58.18
Os10t0481300-01	Rice	cytosol	48.71	55.39
VIT_00s0240g00020.t01	Wine grape	cytosol	28.02	55.08
Os10t0525800-00	Rice	cytosol	50.43	53.67
VIT_19s0015g02830.t01	Wine grape	cytosol	27.59	53.33
GSMUA_Achr1P03800_001	Banana	cytosol	51.72	52.86
VIT_10s0003g04250.t01	Wine grape	cytosol	21.55	52.63
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	50.0	51.56
GSMUA_Achr5P10350_001	Banana	cytosol	51.72	50.85
Os10t0525500-01	Rice	cytosol, plastid	31.47	50.69
EER92034	Sorghum	endoplasmic reticulum	50.43	50.43
VIT_19s0093g00370.t01	Wine grape	cytosol	26.29	50.41
GSMUA_Achr5P10360_001	Banana	cytosol	51.72	50.21
GSMUA_Achr5P10340_001	Banana	cytosol	50.0	50.0
TraesCS1B01G194900.1	Wheat	cytosol	50.0	48.95
TraesCS1D01G189600.1	Wheat	cytosol	49.57	48.52
EER92036	Sorghum	cytosol	49.14	48.51
TraesCS1A01G187000.1	Wheat	cytosol	49.14	48.1
TraesCS5A01G190900.1	Wheat	cytosol	47.41	47.62
TraesCS5D01G200100.1	Wheat	cytosol	47.41	47.62
HORVU1Hr1G049090.2	Barley	cytosol	48.71	47.48
TraesCS5B01G192400.1	Wheat	cytosol	46.55	46.75
Os10t0525400-01	Rice	cytosol, plastid	49.14	46.72
EES00905	Sorghum	cytosol	47.41	46.41
VIT_19s0015g02880.t01	Wine grape	cytosol	41.38	46.15
EER92035	Sorghum	cytosol	47.84	46.06
VIT_19s0015g02590.t01	Wine grape	cytosol	40.95	45.45
VIT_19s0015g02690.t01	Wine grape	cytosol	31.9	45.4
VIT_19s0093g00310.t01	Wine grape	cytosol	42.24	44.75
Zm00001d027557_P001	Maize	cytosol	48.71	44.49
HORVU5Hr1G058000.8	Barley	cytosol	43.97	43.97
HORVU1Hr1G049070.1	Barley	cytosol	48.71	43.63
VIT_19s0015g02700.t01	Wine grape	cytosol	40.95	43.38
VIT_04s0079g00360.t01	Wine grape	cytosol	40.95	43.18
VIT_19s0015g02730.t01	Wine grape	cytosol	40.52	42.92
VIT_19s0093g00150.t01	Wine grape	cytosol	40.52	42.92
VIT_19s0093g00260.t01	Wine grape	cytosol	40.09	42.47
VIT_19s0015g02890.t01	Wine grape	cytosol	39.66	42.01
VIT_00s0240g00050.t01	Wine grape	cytosol	39.66	42.01
VIT_19s0093g00190.t01	Wine grape	cytosol	39.22	41.55
VIT_19s0093g00110.t01	Wine grape	cytosol	39.22	41.55
VIT_19s0093g00220.t01	Wine grape	cytosol	40.09	40.97
VIT_19s0015g02680.t01	Wine grape	cytosol	38.36	40.64
VIT_19s0027g00460.t01	Wine grape	cytosol	38.79	40.36
VIT_19s0093g00350.t01	Wine grape	cytosol	36.21	38.01
VIT_19s0093g00400.t01	Wine grape	cytosol	35.34	37.1
VIT_19s0093g00320.t01	Wine grape	cytosol	34.48	36.2
VIT_19s0093g00160.t01	Wine grape	cytosol	32.33	35.89
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	37.5	30.1
VIT_19s0015g02610.t01	Wine grape	cytosol	40.52	28.75
VIT_19s0093g00290.t01	Wine grape	mitochondrion	12.5	22.66

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100250199	wikigene:100250199	MapMan:18.8.1.4	Gene3D:3.40.30.10	ProteinID:CCB56600
ProteinID:CCB56600.1	UniProt:F6HPH2	EMBL:FN596002	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EntrezGene:LOC100250199	wikigene:LOC100250199	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI00015CB14B	ArrayExpress:VIT_01s0026g01330	EnsemblPlantsGene:VIT_01s0026g01330	EnsemblPlants:VIT_01s0026g01330.t01	unigene:Vvi.20432	RefSeq:XP_002273737
RefSeq:XP_002273737.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:+:10300518..10301575

Molecular Weight (calculated)

25817.4 Da

IEP (calculated)

6.519

GRAVY (calculated)

-0.077

Length

232 amino acids

Sequence
(BLAST)

001: MAKNDVKLLG AWPSPFVMRA RIALNIKSVD YELLEEKLGS KTQLLLQSNP VYKKVPVLIH EHKPICESLI IVQYIDEAWS SGPSILPSDP YDRAIARFWG
101: VYIDDKWFPL LGGIGKAQGE EAKKAAVDQV HEGLMLLEEA FGKCSKGKDF FSGDRIGYLD IALGCFLGWV RVSEKMNGVK LLDEAKMPGL ASWVEKFCAD
201: SAVKDVMPDT DKLSEFARML IQFKANAHPP AS

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.