Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 4
- mitochondrion 1
- cytosol 2
- extracellular 3
- endoplasmic reticulum 4
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0026g01330.t01 | Wine grape | cytosol | 66.28 | 74.57 |
| VIT_01s0026g01340.t01 | Wine grape | cytosol | 62.84 | 70.69 |
| CDY07793 | Canola | cytosol | 37.93 | 61.88 |
| AT1G10370.1 | Thale cress | cytosol | 52.87 | 60.79 |
| Bra019940.1-P | Field mustard | cytosol | 52.49 | 60.35 |
| CDX93432 | Canola | cytosol | 52.11 | 59.91 |
| CDY37984 | Canola | cytosol | 52.11 | 59.91 |
| CDY37985 | Canola | cytosol | 52.11 | 59.91 |
| Bra031708.1-P | Field mustard | cytosol | 51.72 | 59.47 |
| CDY34896 | Canola | cytosol | 51.72 | 59.47 |
| VIT_19s0015g02560.t01 | Wine grape | cytosol | 24.9 | 59.09 |
| AT1G10360.1 | Thale cress | cytosol | 51.34 | 59.03 |
| VIT_00s0240g00020.t01 | Wine grape | cytosol | 24.52 | 54.24 |
| VIT_19s0015g02830.t01 | Wine grape | cytosol | 24.52 | 53.33 |
| Os10t0525800-00 | Rice | cytosol | 44.44 | 53.21 |
| VIT_19s0093g00370.t01 | Wine grape | cytosol | 24.52 | 52.89 |
| VIT_10s0003g04250.t01 | Wine grape | cytosol | 19.16 | 52.63 |
| Os10t0481300-01 | Rice | cytosol | 40.23 | 51.47 |
| Os10t0525500-01 | Rice | cytosol, plastid | 28.35 | 51.39 |
| KRG99195 | Soybean | cytosol | 27.59 | 50.7 |
| GSMUA_Achr5P10350_001 | Banana | cytosol | 45.59 | 50.42 |
| GSMUA_Achr1P03800_001 | Banana | cytosol | 43.68 | 50.22 |
| GSMUA_Achr5P10360_001 | Banana | cytosol | 45.59 | 49.79 |
| TraesCS1B01G194900.1 | Wheat | cytosol | 44.83 | 49.37 |
| Zm00001d029696_P003 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 42.53 | 49.33 |
| GSMUA_Achr5P10340_001 | Banana | cytosol | 43.68 | 49.14 |
| TraesCS1D01G189600.1 | Wheat | cytosol | 44.44 | 48.95 |
| EER92034 | Sorghum | endoplasmic reticulum | 42.91 | 48.28 |
| TraesCS1A01G187000.1 | Wheat | cytosol | 43.68 | 48.1 |
| EER92036 | Sorghum | cytosol | 43.3 | 48.09 |
| HORVU1Hr1G049090.2 | Barley | cytosol | 43.68 | 47.9 |
| EES00905 | Sorghum | cytosol | 43.3 | 47.68 |
| EER92035 | Sorghum | cytosol | 43.3 | 46.89 |
| Os10t0525400-01 | Rice | cytosol, plastid | 43.68 | 46.72 |
| TraesCS5D01G200100.1 | Wheat | cytosol | 40.61 | 45.89 |
| TraesCS5A01G190900.1 | Wheat | cytosol | 40.61 | 45.89 |
| VIT_19s0015g02880.t01 | Wine grape | cytosol | 36.4 | 45.67 |
| TraesCS5B01G192400.1 | Wheat | cytosol | 40.23 | 45.45 |
| VIT_19s0015g02590.t01 | Wine grape | cytosol | 36.4 | 45.45 |
| VIT_19s0015g02690.t01 | Wine grape | cytosol | 28.35 | 45.4 |
| VIT_19s0093g00310.t01 | Wine grape | cytosol | 37.55 | 44.75 |
| HORVU1Hr1G049070.1 | Barley | cytosol | 44.06 | 44.4 |
| VIT_19s0093g00150.t01 | Wine grape | cytosol | 36.78 | 43.84 |
| Zm00001d027557_P001 | Maize | cytosol | 42.53 | 43.7 |
| VIT_19s0015g02700.t01 | Wine grape | cytosol | 36.4 | 43.38 |
| VIT_19s0027g00460.t01 | Wine grape | cytosol | 36.78 | 43.05 |
| VIT_19s0015g02730.t01 | Wine grape | cytosol | 36.02 | 42.92 |
| VIT_19s0015g02890.t01 | Wine grape | cytosol | 36.02 | 42.92 |
| VIT_19s0093g00190.t01 | Wine grape | cytosol | 36.02 | 42.92 |
| VIT_19s0015g02680.t01 | Wine grape | cytosol | 35.63 | 42.47 |
| VIT_19s0093g00110.t01 | Wine grape | cytosol | 35.63 | 42.47 |
| VIT_19s0093g00260.t01 | Wine grape | cytosol | 35.63 | 42.47 |
| VIT_04s0079g00360.t01 | Wine grape | cytosol | 35.63 | 42.27 |
| HORVU5Hr1G058000.8 | Barley | cytosol | 37.55 | 42.24 |
| VIT_00s0240g00050.t01 | Wine grape | cytosol | 34.87 | 41.55 |
| VIT_19s0093g00220.t01 | Wine grape | cytosol | 35.63 | 40.97 |
| VIT_19s0093g00350.t01 | Wine grape | cytosol | 31.8 | 37.56 |
| VIT_19s0093g00400.t01 | Wine grape | cytosol | 31.8 | 37.56 |
| VIT_19s0093g00320.t01 | Wine grape | cytosol | 31.03 | 36.65 |
| VIT_19s0093g00160.t01 | Wine grape | cytosol | 28.35 | 35.41 |
| GSMUA_Achr1P23320_001 | Banana | endoplasmic reticulum, plasma membrane | 32.18 | 29.07 |
| VIT_19s0015g02610.t01 | Wine grape | cytosol | 36.02 | 28.75 |
| VIT_19s0093g00290.t01 | Wine grape | mitochondrion | 11.49 | 23.44 |
Protein Annotations
| Gene3D:1.20.1050.10 | EntrezGene:100267378 | wikigene:100267378 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | EMBL:AM449872 |
| ProteinID:CAN82947 | ProteinID:CAN82947.1 | ProteinID:CCB56595 | ProteinID:CCB56595.1 | UniProt:F6HPG7 | EMBL:FN596002 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006749 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019748 | InterPro:GST_C |
| InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | EntrezGene:LOC100267378 |
| wikigene:LOC100267378 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR11260 |
| PANTHER:PTHR11260:SF487 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | SignalP:SignalP-noTM | InterPro:Thioredoxin-like_sf | UniParc:UPI0002108295 |
| ArrayExpress:VIT_01s0026g01380 | EnsemblPlantsGene:VIT_01s0026g01380 | EnsemblPlants:VIT_01s0026g01380.t01 | RefSeq:XP_002274119 | RefSeq:XP_002274119.1 | SEG:seg |
Description
No Description!
Coordinates
chr1:+:10337712..10348270
Molecular Weight (calculated)
29078.9 Da
IEP (calculated)
4.878
GRAVY (calculated)
-0.009
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLFLNYALT LSIDSAWWLV DQTQTAAAMA TSDVKLLGAW PSPFALRVHI ALNIKSIDYE CLEENLLAKS QLLLQSNPVH KKVPVLIHHD KPICESLAIV
101: QYIDEAWSSA PSILPSDPYD RAVARFWAAY IDDKWFPWLN GVANAQGAEA KKAALDQVRE GLVVLEEAFG KCSKGKDFFS GDRIGYVDIA LGCFLGWVYV
201: AEKRNDVKLL VEDKMPGLAA WANKFCEDGT VKDVMPDKDE LLEFANMILE ARAKLNASSN N
101: QYIDEAWSSA PSILPSDPYD RAVARFWAAY IDDKWFPWLN GVANAQGAEA KKAALDQVRE GLVVLEEAFG KCSKGKDFFS GDRIGYVDIA LGCFLGWVYV
201: AEKRNDVKLL VEDKMPGLAA WANKFCEDGT VKDVMPDKDE LLEFANMILE ARAKLNASSN N
001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA
Arabidopsis Description
GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.