Factsheet for VIT_19s0015g02730.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0015g02880.t01	Wine grape	cytosol	92.24	97.12
VIT_19s0015g02890.t01	Wine grape	cytosol	96.35	96.35
VIT_19s0015g02700.t01	Wine grape	cytosol	94.52	94.52
VIT_19s0015g02590.t01	Wine grape	cytosol	89.95	94.26
VIT_19s0093g00150.t01	Wine grape	cytosol	94.06	94.06
VIT_19s0093g00110.t01	Wine grape	cytosol	92.24	92.24
VIT_19s0093g00310.t01	Wine grape	cytosol	90.41	90.41
VIT_19s0093g00190.t01	Wine grape	cytosol	88.58	88.58
VIT_19s0093g00220.t01	Wine grape	cytosol	91.78	88.55
VIT_19s0015g02560.t01	Wine grape	cytosol	44.29	88.18
VIT_19s0015g02680.t01	Wine grape	cytosol	87.67	87.67
VIT_00s0240g00050.t01	Wine grape	cytosol	85.84	85.84
VIT_19s0015g02830.t01	Wine grape	cytosol	45.66	83.33
VIT_19s0093g00160.t01	Wine grape	cytosol	79.45	83.25
VIT_19s0027g00460.t01	Wine grape	cytosol	83.56	82.06
VIT_00s0240g00020.t01	Wine grape	cytosol	42.92	79.66
VIT_19s0093g00260.t01	Wine grape	cytosol	77.63	77.63
CDX79258	Canola	cytosol	38.81	75.89
VIT_10s0003g04250.t01	Wine grape	cytosol	29.68	68.42
PGSC0003DMT400054729	Potato	cytosol	68.04	67.42
Solyc10g007640.2.1	Tomato	cytosol	68.04	67.42
VIT_19s0015g02610.t01	Wine grape	cytosol	99.09	66.36
VIT_19s0015g02690.t01	Wine grape	cytosol	49.32	66.26
VIT_19s0093g00350.t01	Wine grape	cytosol	65.75	65.16
Solyc12g011300.1.1	Tomato	cytosol	64.84	64.55
VIT_19s0093g00400.t01	Wine grape	cytosol	64.84	64.25
VIT_19s0093g00370.t01	Wine grape	cytosol	35.16	63.64
PGSC0003DMT400020286	Potato	cytosol	58.45	62.75
AT1G78320.1	Thale cress	cytosol	62.1	61.82
PGSC0003DMT400092412	Potato	cytosol	61.19	61.19
VIT_19s0093g00320.t01	Wine grape	cytosol	61.64	61.09
CDX68019	Canola	cytosol	61.19	60.91
Bra003647.1-P	Field mustard	cytosol	61.19	60.91
Solyc10g007620.1.1	Tomato	cytosol	60.27	60.27
VIT_04s0079g00360.t01	Wine grape	cytosol	58.45	58.18
VIT_19s0093g00290.t01	Wine grape	mitochondrion	33.33	57.03
VIT_01s0026g01340.t01	Wine grape	cytosol	43.84	41.38
VIT_01s0026g01330.t01	Wine grape	cytosol	42.92	40.52
VIT_01s0026g01380.t01	Wine grape	endoplasmic reticulum	42.92	36.02

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100232878	wikigene:100232878	EntrezGene:100256345	wikigene:100256345	EntrezGene:100261799
wikigene:100261799	MapMan:18.8.1.4	Gene3D:3.40.30.10	ProteinID:CCB62110	ProteinID:CCB62110.1	UniProt:F6I515
EMBL:FN596747	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
EntrezGene:LOC100232878	wikigene:LOC100232878	EntrezGene:LOC100256345	wikigene:LOC100256345	EntrezGene:LOC100261799	wikigene:LOC100261799
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479
SUPFAM:SSF47616	SUPFAM:SSF52833	TIGR:TC67019	InterPro:Thioredoxin-like_sf	UniParc:UPI00015CDBF5	ArrayExpress:VIT_19s0015g02730
EnsemblPlantsGene:VIT_19s0015g02730	EnsemblPlants:VIT_19s0015g02730.t01	unigene:Vvi.7405	RefSeq:XP_002264825	RefSeq:XP_002264825.1	RefSeq:XP_003634746
RefSeq:XP_003634746.1	RefSeq:XP_003634747	RefSeq:XP_003634747.1	RefSeq:XP_003634748	RefSeq:XP_003634748.1	RefSeq:XP_003634750
RefSeq:XP_003634750.1	RefSeq:XP_003634751	RefSeq:XP_003634751.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr19:-:13089560..13090802

Molecular Weight (calculated)

25431.9 Da

IEP (calculated)

6.153

GRAVY (calculated)

-0.314

Length

219 amino acids

Sequence
(BLAST)

001: MADEIILLDF WPSMFGMRVR VALAEKGLKY EYRQEDLRNK SPLLLEMNPV HKKIPVLIHN GKPICESLII VQYIDEVWKD KSPLLPSDPY QRAQARFWAD
101: YVDKKLYELG GKIWSTKGEE QETGKKEFIE CLKLLEGELG EKPYFGGEKI GFVDVALVTF SCWFYAYETF GNFSIEAECP KLIAWTKRCM EKESVSSSLE
201: DPHKVHGFIM GMRKRFGIE

Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)

001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE

Arabidopsis Description

GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.