Factsheet for Bra019940.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93432	Canola	cytosol	99.56	99.56
AT1G10370.1	Thale cress	cytosol	84.58	84.58
Bra031708.1-P	Field mustard	cytosol	73.13	73.13
PGSC0003DMT400040670	Potato	cytosol	62.56	61.47
Solyc05g006730.2.1	Tomato	mitochondrion	60.79	61.33
Solyc05g006740.2.1	Tomato	cytosol	56.83	60.28
PGSC0003DMT400058271	Potato	cytosol	60.79	59.74
KRG99195	Soybean	cytosol	34.36	54.93
Os10t0525500-01	Rice	cytosol, plastid	34.36	54.17
VIT_01s0026g01380.t01	Wine grape	endoplasmic reticulum	60.35	52.49
Bra007890.1-P	Field mustard	cytosol	52.86	52.17
Os10t0525800-00	Rice	cytosol	49.34	51.38
Bra027840.1-P	Field mustard	cytosol	52.86	51.28
Bra016250.1-P	Field mustard	cytosol	52.86	51.28
Bra024659.1-P	Field mustard	cytosol	51.1	51.1
Os10t0481300-01	Rice	cytosol	45.37	50.49
Bra003970.1-P	Field mustard	cytosol	51.98	50.43
TraesCS1B01G194900.1	Wheat	cytosol	51.98	49.79
GSMUA_Achr5P10350_001	Banana	cytosol	51.1	49.15
GSMUA_Achr5P10340_001	Banana	cytosol	50.22	49.14
GSMUA_Achr5P10360_001	Banana	cytosol	51.54	48.95
GSMUA_Achr1P03800_001	Banana	cytosol	48.9	48.9
Bra016252.1-P	Field mustard	cytosol	49.34	48.7
EER92036	Sorghum	cytosol	50.22	48.51
TraesCS5B01G192400.1	Wheat	cytosol	49.34	48.48
Bra012422.1-P	Field mustard	cytosol	42.29	48.48
TraesCS5D01G200100.1	Wheat	cytosol	49.34	48.48
Bra007889.1-P	Field mustard	mitochondrion	44.05	48.08
TraesCS5A01G190900.1	Wheat	cytosol	48.9	48.05
TraesCS1A01G187000.1	Wheat	cytosol	49.78	47.68
TraesCS1D01G189600.1	Wheat	cytosol	49.78	47.68
EER92035	Sorghum	cytosol	50.22	47.3
EES00905	Sorghum	cytosol	49.34	47.26
HORVU1Hr1G049090.2	Barley	cytosol	49.34	47.06
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.26	46.67
EER92034	Sorghum	endoplasmic reticulum	47.14	46.12
HORVU5Hr1G058000.8	Barley	cytosol	46.7	45.69
Os10t0525400-01	Rice	cytosol, plastid	48.46	45.08
Bra016253.1-P	Field mustard	cytosol	44.93	44.74
Bra027842.1-P	Field mustard	cytosol	29.52	43.51
HORVU1Hr1G049070.1	Barley	cytosol	49.34	43.24
Bra025995.1-P	Field mustard	cytosol	39.65	41.86
Bra003646.1-P	Field mustard	cytosol	40.09	41.74
Bra003644.1-P	Field mustard	cytosol	39.65	41.1
Zm00001d027557_P001	Maize	cytosol	45.81	40.94
Bra035029.1-P	Field mustard	cytosol	39.21	40.83
Bra003645.1-P	Field mustard	cytosol	36.56	40.69
Bra003647.1-P	Field mustard	cytosol	38.77	40.0
Bra026684.1-P	Field mustard	cytosol	38.33	39.73
Bra026681.1-P	Field mustard	cytosol	37.89	39.27
Bra025994.1-P	Field mustard	cytosol	37.44	38.81
Bra038140.1-P	Field mustard	cytosol	37.89	38.39
Bra026680.1-P	Field mustard	cytosol	36.56	37.9
Bra016615.1-P	Field mustard	cytosol	36.56	37.9
Bra035031.1-P	Field mustard	cytosol	36.12	37.27
Bra034977.1-P	Field mustard	cytosol	36.56	36.56
Bra026679.1-P	Field mustard	cytosol	35.24	36.53
Bra025993.1-P	Field mustard	cytosol	33.92	35.0
Bra003648.1-P	Field mustard	cytosol	20.7	31.54
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	37.89	29.76
Bra008357.1-P	Field mustard	cytosol	11.89	23.68

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra019940	EnsemblPlants:Bra019940.1	EnsemblPlants:Bra019940.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0006950	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009651
GO:GO:0009704	GO:GO:0009719	GO:GO:0009791	GO:GO:0009987	GO:GO:0016740	GO:GO:0048527
GO:GO:0060416	GO:GO:0080148	GO:GO:0080167	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M4DTU7	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000253EA11	:	:	:	:

Description

AT1G10370 (E=2e-112) GST30, ATGSTU17, GST30B, ERD9 | ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9); glutathione transferase

Coordinates

chrA06:-:3580365..3581146

Molecular Weight (calculated)

25244.5 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.107

Length

227 amino acids

Sequence
(BLAST)

001: MASDEVKVIG AWASPFVMRP RIALNLKSVP YEFLQESFGA KSELLLKSNP VHKKIPVLIH ADKPVCESNI IVEYVDETWS ASGPSMLPST PYDRAIARFW
101: AAYIDEKWFP SLKSILKAEG EEEKKAVLAQ VEEGNALLEK AFNDCSKGKP FFNGDHIGYL DIAFGCFLAW LRVTELAGGH KLIDEVKTPS LSKWAERFCN
201: DPAVKPVMPE TATLAEFAKK IFAKPPA

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.