Factsheet for Solyc05g006730.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
vacuole 1
mitochondrion 4
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040670	Potato	cytosol	91.11	88.74
Solyc05g006740.2.1	Tomato	cytosol	68.0	71.5
VIT_01s0026g01340.t01	Wine grape	cytosol	68.44	66.38
VIT_01s0026g01330.t01	Wine grape	cytosol	65.78	63.79
Bra019940.1-P	Field mustard	cytosol	61.33	60.79
CDX93432	Canola	cytosol	60.89	60.35
CDY37984	Canola	cytosol	60.89	60.35
Bra031708.1-P	Field mustard	cytosol	60.44	59.91
CDY34896	Canola	cytosol	60.44	59.91
CDY37985	Canola	cytosol	60.44	59.91
AT1G10370.1	Thale cress	cytosol	60.0	59.47
CDY07793	Canola	cytosol	41.33	58.12
AT1G10360.1	Thale cress	cytosol	57.33	56.83
Solyc05g026220.1.1	Tomato	cytosol	39.11	55.0
Solyc05g006750.2.1	Tomato	cytosol	55.11	54.15
GSMUA_Achr1P03800_001	Banana	cytosol	52.0	51.54
GSMUA_Achr5P10350_001	Banana	cytosol	53.33	50.85
GSMUA_Achr5P10340_001	Banana	cytosol	52.0	50.43
GSMUA_Achr5P10360_001	Banana	cytosol	53.33	50.21
KRG99195	Soybean	cytosol	31.56	50.0
Solyc05g026210.1.1	Tomato	nucleus	49.78	48.7
Os10t0525800-00	Rice	cytosol	47.11	48.62
Os10t0481300-01	Rice	cytosol	44.0	48.53
Solyc07g056450.2.1	Tomato	cytosol	29.78	48.2
Os10t0525500-01	Rice	cytosol, plastid	30.22	47.22
EER92036	Sorghum	cytosol	48.44	46.38
Zm00001d029696_P003	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.22	46.22
EER92034	Sorghum	endoplasmic reticulum	46.67	45.26
Solyc07g056430.2.1	Tomato	cytosol	28.0	45.0
EER92035	Sorghum	cytosol	48.0	44.81
TraesCS1B01G194900.1	Wheat	cytosol	47.11	44.73
TraesCS1D01G189600.1	Wheat	cytosol	45.78	43.46
EES00905	Sorghum	cytosol	45.33	43.04
TraesCS1A01G187000.1	Wheat	cytosol	45.33	43.04
TraesCS5D01G200100.1	Wheat	cytosol	44.0	42.86
TraesCS5A01G190900.1	Wheat	cytosol	44.0	42.86
Solyc07g056510.2.1	Tomato	cytosol	41.33	42.47
HORVU1Hr1G049090.2	Barley	cytosol	44.89	42.44
TraesCS5B01G192400.1	Wheat	cytosol	43.56	42.42
Solyc07g056470.2.1	Tomato	plastid	41.33	42.27
Solyc07g056420.2.1	Tomato	extracellular	40.89	41.82
Os10t0525400-01	Rice	cytosol, plastid	44.89	41.39
Solyc07g056480.2.1	Tomato	cytosol, plastid	39.56	40.45
Zm00001d027557_P001	Maize	cytosol	45.33	40.16
Solyc07g056460.2.1	Tomato	plastid	39.11	40.0
Solyc10g007620.1.1	Tomato	cytosol	38.67	39.73
HORVU5Hr1G058000.8	Barley	cytosol	40.89	39.66
Solyc12g011310.1.1	Tomato	plastid	38.22	39.27
Solyc07g056440.2.1	Tomato	cytosol	38.67	39.19
HORVU1Hr1G049070.1	Barley	cytosol	44.89	39.0
Solyc07g056490.2.1	Tomato	extracellular	37.33	38.36
Solyc10g007640.2.1	Tomato	cytosol	36.89	37.56
Solyc02g081240.1.1	Tomato	cytosol	36.44	36.94
Solyc12g011300.1.1	Tomato	cytosol	35.56	36.36
Solyc12g011320.1.1	Tomato	cytosol	33.78	34.7
GSMUA_Achr1P23320_001	Banana	endoplasmic reticulum, plasma membrane	36.0	28.03

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:K4BWJ9	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF487	SUPFAM:SSF47616	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc05g006730.2
EnsemblPlants:Solyc05g006730.2.1	InterPro:Thioredoxin-like_sf	UniParc:UPI000276567C	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:+:1377080..1379013

Molecular Weight (calculated)

25561.1 Da

IEP (calculated)

6.762

GRAVY (calculated)

-0.004

Length

225 amino acids

Sequence
(BLAST)

001: MAKNNLKILG AWPSPYVMRP RIALNIKCLA YDFLEEQFGT KSELLLKSNP IYKKIPVLIH DGKPICESLI IVQYIDENWT NFGHSILPSH PYDRAIARFW
101: AFYIDDKWFP ALCGVAAAQD EDAKKAAMET VIEGLVLLED VFKINSKGKK FFGGDKIGYL DIALGCFLGW LKVNEKLNNV NLLDESRTPS LYQWAKDFCV
201: DSVVKDVMPE TDQLVQAAKI IWAKI

Best Arabidopsis Sequence Match ( AT1G10370.1 )
(BLAST)

001: MASSDVKLIG AWASPFVMRP RIALNLKSVP YEFLQETFGS KSELLLKSNP VHKKIPVLLH ADKPVSESNI IVEYIDDTWS SSGPSILPSD PYDRAMARFW
101: AAYIDEKWFV ALRGFLKAGG EEEKKAVIAQ LEEGNAFLEK AFIDCSKGKP FFNGDNIGYL DIALGCFLAW LRVTELAVSY KILDEAKTPS LSKWAENFCN
201: DPAVKPVMPE TAKLAEFAKK IFPKPQA

Arabidopsis Description

GSTU17Glutathione S-transferase U17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.