Factsheet for Bra003648.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018385.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78340.1	Bra018385.1-P	AT2G29490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68020	Canola	cytosol	24.16	100.0
Bra003646.1-P	Field mustard	cytosol	81.88	55.96
AT1G78340.1	Thale cress	cytosol	72.48	49.54
Bra035029.1-P	Field mustard	cytosol	69.8	47.71
Bra008357.1-P	Field mustard	cytosol	34.9	45.61
KRH13622	Soybean	cytosol	46.31	40.35
Bra003644.1-P	Field mustard	cytosol	57.72	39.27
Bra003645.1-P	Field mustard	cytosol	52.35	38.24
Bra035031.1-P	Field mustard	cytosol	54.36	36.82
Bra026681.1-P	Field mustard	cytosol	51.68	35.16
Bra026680.1-P	Field mustard	cytosol	51.68	35.16
Bra026684.1-P	Field mustard	cytosol	51.68	35.16
Bra025993.1-P	Field mustard	cytosol	51.68	35.0
Bra025994.1-P	Field mustard	cytosol	51.01	34.7
Bra026679.1-P	Field mustard	cytosol	50.34	34.25
Bra025995.1-P	Field mustard	cytosol	48.32	33.49
Bra016615.1-P	Field mustard	cytosol	48.99	33.33
Solyc12g011310.1.1	Tomato	plastid	48.99	33.33
PGSC0003DMT400038054	Potato	endoplasmic reticulum	46.98	31.96
Solyc07g056490.2.1	Tomato	extracellular	46.98	31.96
KRH02498	Soybean	cytosol	46.31	31.65
KRH43843	Soybean	cytosol	45.64	31.05
KRH43845	Soybean	cytosol	45.64	30.63
PGSC0003DMT400071059	Potato	cytosol	44.97	30.45
Bra038140.1-P	Field mustard	cytosol	45.64	30.36
Bra003647.1-P	Field mustard	cytosol	44.3	30.0
KRH13620	Soybean	cytosol	43.62	29.41
VIT_19s0093g00400.t01	Wine grape	cytosol	42.95	28.96
VIT_19s0093g00320.t01	Wine grape	cytosol	42.95	28.96
VIT_19s0093g00350.t01	Wine grape	cytosol	42.95	28.96
KRH13625	Soybean	cytosol	42.28	28.77
KRH43846	Soybean	cytosol	35.57	25.98
Bra034977.1-P	Field mustard	cytosol	38.93	25.55
Bra012422.1-P	Field mustard	cytosol	32.21	24.24
VIT_19s0093g00370.t01	Wine grape	cytosol	17.45	21.49
Bra027840.1-P	Field mustard	cytosol	32.89	20.94
Bra024659.1-P	Field mustard	cytosol	31.54	20.7
Bra019940.1-P	Field mustard	cytosol	31.54	20.7
Bra031708.1-P	Field mustard	cytosol	30.2	19.82
Bra016252.1-P	Field mustard	cytosol	30.2	19.57
Bra007889.1-P	Field mustard	mitochondrion	26.17	18.75
Bra016253.1-P	Field mustard	cytosol	27.52	17.98
Bra016250.1-P	Field mustard	cytosol	28.19	17.95
Bra007890.1-P	Field mustard	cytosol	27.52	17.83
Bra003970.1-P	Field mustard	cytosol	27.52	17.52
Bra027842.1-P	Field mustard	cytosol	17.45	16.88
VIT_10s0003g04250.t01	Wine grape	cytosol	8.05	12.63

Protein Annotations

EnsemblPlants:Bra003648.1	EnsemblPlants:Bra003648.1-P	EnsemblPlantsGene:Bra003648	Gene3D:1.20.1050.10	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:IPR010987	PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	PFscan:PS50405	SUPFAM:SSF47616	TMHMM:TMhelix
UniParc:UPI000254145A	UniProt:M4CHG5	MapMan:35.1	:	:	:

Description

AT1G78340 (E=5e-055) ATGSTU22 | ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22); glutathione transferase

Coordinates

chrA07:-:14225609..14226352

Molecular Weight (calculated)

17771.5 Da

IEP (calculated)

9.754

GRAVY (calculated)

-0.401

Length

149 amino acids

Sequence
(BLAST)

001: MNVVQYIDEV WSAKNPLLSS NPYQRAQARF WVDFIDTKVR FSSQWMRYGQ QKARYKQEKA KKEYIEALKI LDKPYFGGDN FGFVYIAMTG YYMWFEAFKK
101: CGNFSIEREC PTLMALAKRC LQRDSVVNSF PNPERIVEFA FKIRKIYCV

Best Arabidopsis Sequence Match ( AT1G17180.1 )
(BLAST)

001: MADEVILLDF WPSMFGMRTR IALEEKNVKF DYREQDLWNK SPILLEMNPV HKKIPVLIHN GNPVCESLIQ IEYIDEVWPS KTPLLPSDPY QRAQAKFWGD
101: FIDKKVYASA RLIWGAKGEE HEAGKKEFIE ILKTLESELG DKTYFGGETF GYVDIALIGF YSWFEAYEKF GSFSIEAECP KLIAWGKRCV ERESVAKSLP
201: DSEKIIKFVP ELRKKLGIEI E

Arabidopsis Description

GSTU25Glutathione S-transferase U25 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.