Factsheet for Bra003644.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016615.1-P
Bra018385.1-P
Bra025993.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78380.1	Bra016615.1-P	AT1G17190.1	21798944
AT1G78380.1	Bra025993.1-P	AT1G17190.1	21798944
AT1G78380.1	Bra018385.1-P	AT2G29490.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68016	Canola	cytosol	99.54	99.54
CDX79261	Canola	cytosol	99.09	99.09
AT1G78380.1	Thale cress	cytosol	85.39	85.39
Bra008357.1-P	Field mustard	cytosol	41.1	78.95
Bra003646.1-P	Field mustard	cytosol	73.97	74.31
Bra026684.1-P	Field mustard	cytosol	73.06	73.06
Bra026681.1-P	Field mustard	cytosol	72.6	72.6
Bra035031.1-P	Field mustard	cytosol	72.6	72.27
Bra025994.1-P	Field mustard	cytosol	71.23	71.23
Bra026680.1-P	Field mustard	cytosol	70.78	70.78
Bra035029.1-P	Field mustard	cytosol	70.32	70.64
Bra025995.1-P	Field mustard	cytosol	68.95	70.23
Bra003645.1-P	Field mustard	cytosol	64.38	69.12
Bra026679.1-P	Field mustard	cytosol	68.04	68.04
KRH13622	Soybean	cytosol	52.97	67.84
KRH43843	Soybean	cytosol	67.58	67.58
Bra003647.1-P	Field mustard	cytosol	65.75	65.45
Solyc07g056490.2.1	Tomato	extracellular	64.38	64.38
Bra016615.1-P	Field mustard	cytosol	63.47	63.47
PGSC0003DMT400038054	Potato	endoplasmic reticulum	63.01	63.01
KRH13625	Soybean	cytosol	63.01	63.01
Bra025993.1-P	Field mustard	cytosol	62.56	62.27
PGSC0003DMT400071059	Potato	cytosol	62.56	62.27
Bra038140.1-P	Field mustard	cytosol	63.01	61.61
Solyc12g011310.1.1	Tomato	plastid	61.19	61.19
KRH43845	Soybean	cytosol	60.73	59.91
KRH02498	Soybean	cytosol	59.36	59.63
VIT_19s0093g00370.t01	Wine grape	cytosol	32.88	59.5
Bra003648.1-P	Field mustard	cytosol	39.27	57.72
VIT_19s0093g00350.t01	Wine grape	cytosol	57.53	57.01
KRH13620	Soybean	cytosol	57.08	56.56
VIT_19s0093g00320.t01	Wine grape	cytosol	56.16	55.66
VIT_19s0093g00400.t01	Wine grape	cytosol	55.71	55.2
VIT_10s0003g04250.t01	Wine grape	cytosol	23.74	54.74
KRH43846	Soybean	cytosol	49.32	52.94
Bra034977.1-P	Field mustard	cytosol	53.88	51.98
Bra027840.1-P	Field mustard	cytosol	44.29	41.45
Bra031708.1-P	Field mustard	cytosol	42.47	40.97
Bra019940.1-P	Field mustard	cytosol	41.1	39.65
Bra007889.1-P	Field mustard	mitochondrion	36.99	38.94
Bra024659.1-P	Field mustard	cytosol	39.27	37.89
Bra007890.1-P	Field mustard	cytosol	39.27	37.39
Bra016250.1-P	Field mustard	cytosol	39.73	37.18
Bra016252.1-P	Field mustard	cytosol	38.81	36.96
Bra003970.1-P	Field mustard	cytosol	38.81	36.32
Bra016253.1-P	Field mustard	cytosol	36.99	35.53
Bra012422.1-P	Field mustard	cytosol	30.59	33.84
Bra027842.1-P	Field mustard	cytosol	21.0	29.87

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra003644	EnsemblPlants:Bra003644.1	EnsemblPlants:Bra003644.1-P
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005829	GO:GO:0005886	GO:GO:0006950
GO:GO:0006979	GO:GO:0007154	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009605	GO:GO:0009628	GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0042631
GO:GO:0043295	GO:GO:0046686	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:M4CHG1	PFAM:PF02798	PFAM:PF13410	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF479	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002541456
SEG:seg	:	:	:	:	:

Description

AT1G78380 (E=8e-103) ATGSTU19, GST8 | ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19); glutathione binding / glutathione transferase

Coordinates

chrA07:+:14214166..14215361

Molecular Weight (calculated)

25617.0 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.463

Length

219 amino acids

Sequence
(BLAST)

001: MAKEVILLDF WPSMYGMRTR IALREKGVDF EYRDENLREK SPLLLQMNPV HKKIPVLIHN GKPVCESAIQ VQYIDEVWPH KNPILPSDPY QRAQARFWVD
101: FIDKKMYEAQ RKVYATKGEE QETGKKEFIE ILKTLESELG DKPYFGGDDF GYVDIGLIGF YTWFPGYEKF GNFSIEAECP KLIAWAKRCM QRESVAKSLP
201: DPEKVVEFMA MLRKKFGVE

Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)

001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE

Arabidopsis Description

GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.