CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX79923
CDY22534
CDY23835
CDY35405

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11630.1	CDX79923	AT2G41680.1	25448674
AT3G11630.1	CDY22534	AT2G41680.1	25448674
AT3G11630.1	CDY23835	AT2G41680.1	25448674
AT3G11630.1	CDY35405	AT2G41680.1	25448674

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67317	Canola	endoplasmic reticulum	53.73	91.72
GSMUA_Achr3P02970_001	Banana	cytosol	14.18	88.37
CDY01041	Canola	plastid	83.21	85.77
CDX73858	Canola	plastid	94.03	84.28
CDY67795	Canola	cytosol	76.49	83.33
AT3G11630.1	Thale cress	plastid	82.46	83.08
CDY56598	Canola	cytosol	85.07	82.31
CDY08508	Canola	plastid	79.85	81.99
EES06920	Sorghum	plastid	73.88	76.15
Zm00001d050666_P001	Maize	plastid	73.51	75.77
Zm00001d016736_P001	Maize	extracellular, mitochondrion, plastid	72.76	75.0
Os02t0537700-01	Rice	extracellular	72.76	74.71
PGSC0003DMT400072569	Potato	cytosol, extracellular, plastid	73.51	73.78
Solyc01g007740.2.1	Tomato	plastid	73.51	73.78
TraesCS2A01G297500.1	Wheat	plastid	70.15	72.87
TraesCS2D01G295500.2	Wheat	plastid	70.15	72.87
Solyc10g082030.1.1	Tomato	plastid	72.39	72.66
HORVU2Hr1G073760.2	Barley	plastid	70.15	71.76
TraesCS2B01G313700.1	Wheat	golgi, plastid	70.15	71.76
VIT_08s0007g02490.t01	Wine grape	plastid	72.76	71.43
PGSC0003DMT400042222	Potato	plastid	72.01	70.96
KRH67987	Soybean	endoplasmic reticulum	48.13	66.49
CDY13290	Canola	cytosol	9.33	32.47
CDY72143	Canola	cytosol	10.07	21.26
CDY72482	Canola	cytosol	7.84	20.0

Protein Annotations

KEGG:00480+1.11.1.15	MapMan:10.5.3.1	Gene3D:3.40.30.10	GO:A0A078CAP4	InterPro:AhpC/TSA	EnsemblPlants:CDX73860
ProteinID:CDX73860	ProteinID:CDX73860.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016209	GO:GO:0016491	GO:GO:0019725	GO:GO:0045454	GO:GO:0051920
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00111567001	InterPro:IPR013766	PFAM:PF00578	PFAM:PF10417	PIRSF:PIRSF000239
PFscan:PS51352	PANTHER:PTHR10681	PANTHER:PTHR10681:SF140	InterPro:Peroxiredoxin_AhpC-typ	InterPro:Peroxiredoxin_C	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0004EE36D4	SEG:seg	:	:

Description

BnaA03g31870D

Coordinates

chrLK031800:-:255298..257213

Molecular Weight (calculated)

29414.3 Da

IEP (calculated)

7.500

GRAVY (calculated)

-0.060

Length

268 amino acids

Sequence
(BLAST)

001: MASVASSTTL ISSTRILLPA TKSPLLPSPS LSFLPTLSSP SPSASLRLAR PSPLTSIRSS SRRSFAVKAQ TDDLPLVGNK APDFEAEAVF DQEFIKVKLS
101: EYIGKKYVIL FFYPLDFTFV CPTEITAFSD RYAEFEKLNT QVLGVSVDSV FSHLAWVQTD RKSGGLGDLN YPLISDVTKS ISKSFGVLIH DQGIALRGLF
201: IIDKEGVIQH STINNLGIGR SVDETMRTLQ ALQYIQENPD EVCPAGWKPG EKSMKPDPKL SKEYFSAI

Best Arabidopsis Sequence Match ( AT5G06290.1 )
(BLAST)

001: MSMASIASSS STTLLSSSRV LLPSKSSLLS PTVSFPRIIP SSSASSSSLC SGFSSLGSLT TNRSASRRNF AVKAQADDLP LVGNKAPDFE AEAVFDQEFI
101: KVKLSEYIGK KYVILFFYPL DFTFVCPTEI TAFSDRYEEF EKLNTEVLGV SVDSVFSHLA WVQTDRKSGG LGDLNYPLVS DITKSISKSF GVLIPDQGIA
201: LRGLFIIDKE GVIQHSTINN LGIGRSVDET MRTLQALQYV QENPDEVCPA GWKPGEKSMK PDPKLSKEYF SAI

Arabidopsis Description

2-Cys Prx B2-Cys peroxiredoxin BAS1-like, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C5R8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.