Factsheet for HORVU2Hr1G022120.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G147900.1	Wheat	plastid	72.6	80.13
TraesCS2A01G125400.1	Wheat	cytosol, plastid	72.41	79.74
TraesCS2D01G128500.1	Wheat	plastid	72.02	79.14
Os07t0661800-01	Rice	nucleus	47.75	77.96
CDY08398	Canola	cytosol	3.33	70.83
HORVU1Hr1G083960.6	Barley	nucleus	76.32	69.27
HORVU2Hr1G022140.3	Barley	nucleus	75.34	68.75
HORVU2Hr1G022110.2	Barley	plastid	69.67	65.08
CDX98286	Canola	cytosol	17.03	64.44
EER97682	Sorghum	endoplasmic reticulum	69.08	62.48
GSMUA_AchrUn_...	Banana	nucleus	65.56	60.04
AT3G12860.1	Thale cress	nucleus	58.51	59.92
CDY10510	Canola	nucleus	59.3	59.06
GSMUA_Achr5P08210_001	Banana	nucleus	64.19	58.99
CDY59117	Canola	nucleus	59.3	58.84
CDX82572	Canola	nucleus	58.12	58.81
Bra001474.1-P	Field mustard	nucleus	58.12	58.81
CDY57300	Canola	nucleus	58.12	58.81
CDY42406	Canola	nucleus	59.49	58.57
CDY63487	Canola	nucleus	59.69	58.54
Bra040785.1-P	Field mustard	nucleus	59.69	58.54
VIT_17s0000g01720.t01	Wine grape	nucleus	63.6	58.24
Bra030816.1-P	Field mustard	nucleus	59.1	58.19
PGSC0003DMT400007150	Potato	nucleus	62.04	57.32
Solyc01g100570.2.1	Tomato	nucleus	61.64	56.96
KRH03927	Soybean	nucleus	61.06	56.83
AT1G56110.1	Thale cress	nucleus	57.73	56.51
KRH57211	Soybean	nucleus	60.67	56.36
KRH48644	Soybean	nucleus	60.67	56.16
Bra033094.1-P	Field mustard	cytosol	48.34	55.51
CDY44398	Canola	cytosol	48.34	55.51
CDY04069	Canola	cytosol	48.34	55.38
Bra034724.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	21.14	48.0
CDY52879	Canola	nucleus	28.38	44.89
CDY08399	Canola	endoplasmic reticulum, plasma membrane	13.31	38.42
HORVU4Hr1G041810.4	Barley	cytosol	35.23	33.15
HORVU2Hr1G020690.6	Barley	cytosol	35.03	33.15

Protein Annotations

EnsemblPlants:HORVU2Hr1G022120.1	EnsemblPlantsGene:HORVU2Hr1G022120	Gene3D:1.10.150.460	Gene3D:1.10.246.90	Gene3D:1.10.287.660	InterPro:Helix_hairpin_bin_sf
InterPro:IPR002687	InterPro:IPR029012	InterPro:NOP5_N	InterPro:NOSIC	InterPro:Nop_dom	InterPro:Nop_dom_sf
PANTHER:PTHR10894	PANTHER:PTHR10894:SF0	PFAM:PF01798	PFAM:PF08156	PFscan:PS51358	SEG:seg
SMART:SM00931	SUPFAM:SSF89124	UniParc:UPI000B47B3FB	UniProt:A0A287HBV9	MapMan:17.1.1.2.1.5.2	:

Description

No Description!

Coordinates

chrchr2H:+:63814360..63818145

Molecular Weight (calculated)

57216.2 Da

IEP (calculated)

9.245

GRAVY (calculated)

-0.276

Length

511 amino acids

Sequence
(BLAST)

001: GNPTIRPQRS QLLNPSLFPA PASQPPRLPP AKRAGEMVLY LLFESASGYA LFHAYGIRKI GQSVDAVRST LLDLKRFRRA IKLDGFTPFM SAVDALSQCN
101: AISEGIMTDK LRNFLELYLP KEIPGKKATF TVGVMEPKVG SHITEATGIT CQSDDYIQEL LRAVRLHFGQ LFDKLKPYDL EKSQLDLGHS YSRVKVKSNA
201: NRVDNMMTQA IFLLDTLDRD VNFFSMRVRK WYGWHFPELV KIVNDNYLYA KLAKFVVNKS DLSEEDIPAL ADLIGDEDKA KQIVEAAKAS MGQDLSPVGL
301: INVQQFSQRV MNLSDYRKNL YEYLVTKMND IAPNLTSLIG EMIGARLISH AGSLSNLAKF PSSTLQILGA EKALFRALKT GGNIPKHGII FYSSFIRRAS
401: TKNKGKMARY LANKCSIASR VDCYSDMSSS ILGEKMREQV EERLDFLEKG VAPCKNLVVM KAAVERMTNT VSEEDKEENV GIFAKKKKSE TETDDDTMDL
501: DKPAMHSTLC T

Best Arabidopsis Sequence Match ( AT1G56110.1 )
(BLAST)

001: MAMYVIYESS SGYGLFEVHG LDEIGQNTEA VRTSVSDLSR FGRVVQLTAF HPFESALDAL NQVNAVSEGV MTDELRSFLE LNLPKVKEGK KPKFSLGLAE
101: PKLGSHIFEA TKIPCQSNEF VLELLRGVRQ HFDRFIKDLK PGDLEKSQLG LAHSYSRAKV KFNVNRVDNM VIQAIFMLDT LDKDINSFAM RVREWYSWHF
201: PELVKIVNDN YLYARVSKMI DDKSKLTEDH IPMLTEVLGD EDKAKEVIEA GKASMGSDLS PLDLINVQTF AQKVMDLADY RKKLYDYLVT KMSDIAPNLA
301: ALIGEMVGAR LISHAGSLTN LAKCPSSTLQ ILGAEKALFR ALKTRGNTPK YGLIFHSSFI GRASAKNKGR IARYLANKCS IASRIDCFAD GATTAFGEKL
401: REQVEERLEF YDKGVAPRKN VDVMKEVIEN LKQEEEGKEP VDASVKKSKK KKAKGEEEEE VVAMEEDKSE KKKKKEKRKM ETAEENEKSE KKKTKKSKAG
501: GEEETDDGHS TKKKKKKSKS AE

Arabidopsis Description

NOP56At1g56110/T6H22_9 [Source:UniProtKB/TrEMBL;Acc:Q9SGT7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.