Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G164600.1 | Wheat | plastid | 98.08 | 97.45 |
| GSMUA_Achr7P05510_001 | Banana | cytosol | 59.29 | 74.3 |
| Os09t0133600-01 | Rice | plastid | 74.36 | 72.73 |
| HORVU0Hr1G012460.1 | Barley | cytosol, mitochondrion, nucleus | 83.65 | 69.97 |
| Zm00001d003470_P001 | Maize | plastid | 71.15 | 69.81 |
| Zm00001d025574_P001 | Maize | extracellular | 69.87 | 69.43 |
| EES12270 | Sorghum | plastid | 72.76 | 68.79 |
| CDY71809 | Canola | plastid | 38.46 | 63.83 |
| GSMUA_Achr3P12980_001 | Banana | plastid | 62.82 | 61.25 |
| KRH11500 | Soybean | plastid | 58.33 | 59.48 |
| GSMUA_Achr4P20110_001 | Banana | plastid | 58.01 | 58.01 |
| KRH36517 | Soybean | plastid | 58.01 | 58.01 |
| CDX79139 | Canola | plastid | 57.69 | 56.43 |
| PGSC0003DMT400043112 | Potato | extracellular | 58.65 | 56.13 |
| Bra013602.1-P | Field mustard | plastid | 57.37 | 56.11 |
| Solyc02g081170.2.1 | Tomato | plastid | 58.33 | 55.83 |
| CDX82925 | Canola | plastid | 56.41 | 55.52 |
| CDX90850 | Canola | plastid | 56.09 | 55.38 |
| CDY16684 | Canola | plastid | 56.41 | 55.35 |
| Bra029481.1-P | Field mustard | plastid | 56.41 | 55.35 |
| CDY21291 | Canola | plastid | 55.77 | 55.06 |
| AT4G04020.1 | Thale cress | plastid | 55.45 | 54.4 |
| AT4G22240.1 | Thale cress | plastid | 53.53 | 53.87 |
| Bra000785.1-P | Field mustard | plastid | 56.09 | 53.52 |
| CDX94540 | Canola | plastid | 19.23 | 40.27 |
| TraesCS1B01G208500.1 | Wheat | plastid | 38.46 | 33.33 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G162100.1 | EnsemblPlantsGene:TraesCS5B01G162100 | InterPro:PAP/fibrillin_dom | PANTHER:PTHR31906 | PANTHER:PTHR31906:SF7 | PFAM:PF04755 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:299020207..299023288
Molecular Weight (calculated)
32946.4 Da
IEP (calculated)
8.440
GRAVY (calculated)
0.056
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVASLNAV SLFAPSPQAP GATAARGRLL VPAARRFPSL RAARRVVAAR AAPVDADDEW GKEPAVGGTA VAEAPSEAAA AASEVAALKL KLKAALYGTE
101: RGLRASSETR AEVVELITQL EARNPTPAPT EALTLLNGKW ILAYTSFSQL FPLLGSGRLQ ALVKVDEISQ TIDSENFGVQ NCIKFSGPLA STSVSTNAKF
201: EIRSPKRVQI KFEEGIIGTP QLTDSIVLPE KFEFFGQNID LSPLSGIFTS IENAASSVAK TISGQPPLKI PFRSESAGSW LLTTYLDAEL RISRGDGSSI
301: FVLFKEGSSL SI
101: RGLRASSETR AEVVELITQL EARNPTPAPT EALTLLNGKW ILAYTSFSQL FPLLGSGRLQ ALVKVDEISQ TIDSENFGVQ NCIKFSGPLA STSVSTNAKF
201: EIRSPKRVQI KFEEGIIGTP QLTDSIVLPE KFEFFGQNID LSPLSGIFTS IENAASSVAK TISGQPPLKI PFRSESAGSW LLTTYLDAEL RISRGDGSSI
301: FVLFKEGSSL SI
001: MATVPLFTQF PCKTLNPSSS NTKHQSKSPI LLPINSINRR SEIGVSVHRP DFKIRATDID DEWGQDGVER VFASSSTVSV ADKAIESVEE TERLKRSLAD
101: SLYGTDRGLS VSSDTRAEIS ELITQLESKN PTPAPNEALF LLNGKWILAY TSFVGLFPLL SRRIEPLVKV DEISQTIDSD SFTVQNSVRF AGPFSTTSFS
201: TNAKFEIRSP KRVQIKFEQG VIGTPQLTDS IEIPESVEVL GQKIDLNPIK GLLTSVQDTA SSVARTISNQ PPLKFSLPSD NTQSWLLTTY LDKDLRISRG
301: DGGSVYVLIK EGSSLLNP
101: SLYGTDRGLS VSSDTRAEIS ELITQLESKN PTPAPNEALF LLNGKWILAY TSFVGLFPLL SRRIEPLVKV DEISQTIDSD SFTVQNSVRF AGPFSTTSFS
201: TNAKFEIRSP KRVQIKFEQG VIGTPQLTDS IEIPESVEVL GQKIDLNPIK GLLTSVQDTA SSVARTISNQ PPLKFSLPSD NTQSWLLTTY LDKDLRISRG
301: DGGSVYVLIK EGSSLLNP
Arabidopsis Description
PAP1Probable plastid-lipid-associated protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81439]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.