Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G270200.1 | Wheat | mitochondrion | 90.65 | 91.97 |
| TraesCS1D01G205200.1 | Wheat | mitochondrion | 89.21 | 90.51 |
| TraesCS5D01G326900.1 | Wheat | mitochondrion | 89.21 | 89.86 |
| TraesCS3B01G187800.1 | Wheat | mitochondrion | 88.49 | 89.78 |
| TraesCS2B01G338000.1 | Wheat | mitochondrion | 71.22 | 87.61 |
| TraesCS1D01G183400.1 | Wheat | mitochondrion | 89.21 | 84.35 |
| HORVU6Hr1G037290.1 | Barley | cytosol, mitochondrion | 89.93 | 83.89 |
| CAA33935 | Rice | cytosol, mitochondrion | 86.33 | 80.54 |
| TraesCS6A01G192200.1 | Wheat | mitochondrion | 84.89 | 79.73 |
| Os12t0488300-00 | Rice | mitochondrion | 73.38 | 69.39 |
| VIT_17s0000g02610.t01 | Wine grape | cytosol, mitochondrion | 19.42 | 49.09 |
| GSMUA_Achr11P... | Banana | cytosol | 43.88 | 47.29 |
| ATCG00810.1 | Thale cress | mitochondrion | 38.13 | 33.12 |
| CDY28604 | Canola | mitochondrion | 38.13 | 33.12 |
| CDY21180 | Canola | mitochondrion | 38.13 | 33.12 |
| CDX91812 | Canola | mitochondrion | 38.13 | 33.12 |
| KRG93170 | Soybean | mitochondrion | 34.53 | 24.24 |
| KRH56510 | Soybean | plastid | 34.53 | 22.97 |
Protein Annotations
| Gene3D:3.90.470.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | InterPro:IPR036394 |
| PFAM:PF00237 | PANTHER:PTHR13501 | PANTHER:PTHR13501:SF7 | InterPro:Ribosomal_L22 | InterPro:Ribosomal_L22/L17_sf | InterPro:Ribosomal_L22_bac/chlpt-type |
| SUPFAM:SSF54843 | EnsemblPlantsGene:TraesCS5B01G204300 | EnsemblPlants:TraesCS5B01G204300.1 | TIGR:cd00336 | : | : |
Description
No Description!
Coordinates
chr5B:-:372162905..372163728
Molecular Weight (calculated)
16355.6 Da
IEP (calculated)
11.062
GRAVY (calculated)
-0.213
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSFKLVKYI PRIKKKKSGL RKLARKVPTD HLLKFERVFK AQKCIPMSVF NAQKVLNEIR WCYYEEIVMI LNLMPYRASY PILKLVYSAA ANATHYRNFD
101: KANLFITKAE VSRSTIMKKF RPRARGRSFP IKKACVPFC
101: KANLFITKAE VSRSTIMKKF RPRARGRSFP IKKACVPFC
001: MIKKRKKKSY TEVYALGQYI SMSAHKARRV IDQIRGRSYE EALMILELMP YRGCYPIFKL VYSAAANASH NKGFKETNLV ISKAEVNQGN TVKKLKPRAR
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK
Arabidopsis Description
RPL2250S ribosomal protein L22, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56795]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.