Factsheet for Os12t0488300-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CAA33935	Rice	cytosol, mitochondrion	82.99	81.88
TraesCSU01G270200.1	Wheat	mitochondrion	73.47	78.83
TraesCS1D01G205200.1	Wheat	mitochondrion	72.79	78.1
TraesCS5D01G219900.1	Wheat	mitochondrion	72.79	78.1
AGP50794	Barley	cytosol, mitochondrion	78.91	77.85
HORVU6Hr1G037290.1	Barley	cytosol, mitochondrion	78.91	77.85
HORVU2Hr1G051410.1	Barley	cytosol, mitochondrion	78.91	77.85
TraesCS6D01G175100.1	Wheat	plastid	78.91	77.85
TraesCS5D01G456700.1	Wheat	mitochondrion	72.11	77.37
HORVU5Hr1G064950.1	Barley	cytosol, mitochondrion	78.23	77.18
HORVU7Hr1G065870.1	Barley	cytosol, mitochondrion	78.23	77.18
TraesCS7D01G254800.1	Wheat	cytosol, mitochondrion	78.23	77.18
TraesCS3A01G431600.1	Wheat	cytosol, mitochondrion	78.23	77.18
TraesCS3B01G187800.1	Wheat	mitochondrion	71.43	76.64
TraesCS5A01G436400.1	Wheat	mitochondrion	71.43	76.09
TraesCS5D01G326900.1	Wheat	mitochondrion	71.43	76.09
TraesCS2A01G241400.1	Wheat	mitochondrion	65.99	74.62
TraesCS2B01G338000.1	Wheat	mitochondrion	57.14	74.34
TraesCS5B01G204300.1	Wheat	mitochondrion	69.39	73.38
TraesCS1D01G183400.1	Wheat	mitochondrion	72.11	72.11
TraesCS6A01G192200.1	Wheat	mitochondrion	69.39	68.92
HORVU7Hr1G100990.2	Barley	mitochondrion	38.1	60.22
VIT_17s0000g02610.t01	Wine grape	cytosol, mitochondrion	19.73	52.73
GSMUA_Achr11P...	Banana	cytosol	45.58	51.94
Os07t0273150-00	Rice	cytosol	31.97	47.96
CDY28604	Canola	mitochondrion	40.82	37.5
CDY21180	Canola	mitochondrion	40.82	37.5
CDX91812	Canola	mitochondrion	40.82	37.5
ATCG00810.1	Thale cress	mitochondrion	40.82	37.5
KRG93170	Soybean	mitochondrion	35.37	26.26
KRH56510	Soybean	plastid	35.37	24.88

Protein Annotations

MapMan:17.7.2.1.20	Gene3D:3.90.470.10	UniProt:A0A0P0YAA5	ProteinID:BAT17183.1	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934
GO:GO:0019538	InterPro:IPR036394	HAMAP:MF_01331_B	EnsemblPlantsGene:Os12g0488300	EnsemblPlants:Os12t0488300-00	PFAM:PF00237
PANTHER:PTHR13501	PANTHER:PTHR13501:SF7	InterPro:Ribosomal_L22	InterPro:Ribosomal_L22/L17_sf	InterPro:Ribosomal_L22_bac/chlpt-type	SUPFAM:SSF54843
UniParc:UPI0003939ACC	SEG:seg	:	:	:	:

Description

Similar to ribosomal protein L22. (Os12t0488300-00)

Coordinates

chr12:+:18287172..18287652

Molecular Weight (calculated)

17351.8 Da

IEP (calculated)

10.970

GRAVY (calculated)

-0.280

Length

147 amino acids

Sequence
(BLAST)

001: MTSFKLLKYT PRIKKKKSGP KKLRRKVYQP IVYLSTRVFK ARKHIHMSVF KVQRVMDEIC WCYYEETVMI LNLMPYRASY PILKLVYSAA ANATHYKDFD
101: KANLFITKAE VNRSTIMNKF RPQARGRSSP INKTMCHITI LLNIVRA

Best Arabidopsis Sequence Match ( ATCG00810.1 )
(BLAST)

001: MIKKRKKKSY TEVYALGQYI SMSAHKARRV IDQIRGRSYE EALMILELMP YRGCYPIFKL VYSAAANASH NKGFKETNLV ISKAEVNQGN TVKKLKPRAR
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK

Arabidopsis Description

RPL2250S ribosomal protein L22, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56795]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.