Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g02610.t01 | Wine grape | cytosol, mitochondrion | 33.33 | 78.18 |
| HORVU4Hr1G028100.1 | Barley | cytosol, golgi, mitochondrion | 24.81 | 56.14 |
| ATCG00810.1 | Thale cress | mitochondrion | 65.12 | 52.5 |
| CDX91812 | Canola | mitochondrion | 65.12 | 52.5 |
| CDY21180 | Canola | mitochondrion | 64.34 | 51.88 |
| CDY28604 | Canola | mitochondrion | 64.34 | 51.88 |
| AGP50794 | Barley | cytosol, mitochondrion | 57.36 | 49.66 |
| TraesCS7D01G254800.1 | Wheat | cytosol, mitochondrion | 57.36 | 49.66 |
| TraesCS6D01G175100.1 | Wheat | plastid | 57.36 | 49.66 |
| HORVU6Hr1G037290.1 | Barley | cytosol, mitochondrion | 57.36 | 49.66 |
| HORVU2Hr1G051410.1 | Barley | cytosol, mitochondrion | 57.36 | 49.66 |
| TraesCSU01G270200.1 | Wheat | mitochondrion | 52.71 | 49.63 |
| TraesCS5D01G219900.1 | Wheat | mitochondrion | 52.71 | 49.63 |
| TraesCS3B01G187800.1 | Wheat | mitochondrion | 52.71 | 49.63 |
| TraesCS1D01G205200.1 | Wheat | mitochondrion | 52.71 | 49.63 |
| HORVU7Hr1G065870.1 | Barley | cytosol, mitochondrion | 56.59 | 48.99 |
| HORVU5Hr1G064950.1 | Barley | cytosol, mitochondrion | 56.59 | 48.99 |
| TraesCS3A01G431600.1 | Wheat | cytosol, mitochondrion | 55.81 | 48.32 |
| CAA33935 | Rice | cytosol, mitochondrion | 55.81 | 48.32 |
| TraesCS5A01G436400.1 | Wheat | mitochondrion | 50.39 | 47.1 |
| TraesCS5D01G326900.1 | Wheat | mitochondrion | 50.39 | 47.1 |
| TraesCS5D01G456700.1 | Wheat | mitochondrion | 49.61 | 46.72 |
| TraesCS1D01G183400.1 | Wheat | mitochondrion | 51.94 | 45.58 |
| Os12t0488300-00 | Rice | mitochondrion | 51.94 | 45.58 |
| TraesCS5B01G204300.1 | Wheat | mitochondrion | 47.29 | 43.88 |
| TraesCS6A01G192200.1 | Wheat | mitochondrion | 48.84 | 42.57 |
| TraesCS2B01G338000.1 | Wheat | mitochondrion | 37.21 | 42.48 |
| TraesCS2A01G241400.1 | Wheat | mitochondrion | 42.64 | 42.31 |
| HORVU7Hr1G100990.2 | Barley | mitochondrion | 28.68 | 39.78 |
| KRG93170 | Soybean | mitochondrion | 49.61 | 32.32 |
| KRH56510 | Soybean | plastid | 50.39 | 31.1 |
| Os07t0273150-00 | Rice | cytosol | 20.16 | 26.53 |
Protein Annotations
| MapMan:17.7.2.1.20 | Gene3D:3.90.470.10 | ProteinID:CCW72416.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0015934 |
| GO:GO:0019538 | GO:GO:0019843 | GO:GO:0030529 | EnsemblPlantsGene:GSMUA_Achr11G15530_001 | EnsemblPlants:GSMUA_Achr11P15530_001 | EnsemblPlants:GSMUA_Achr11T15530_001 |
| InterPro:IPR036394 | UniProt:M0RSI3 | HAMAP:MF_01331_B | PFAM:PF00237 | ScanProsite:PS00464 | PANTHER:PTHR13501 |
| PANTHER:PTHR13501:SF7 | InterPro:Ribosomal_L22 | InterPro:Ribosomal_L22/L17_CS | InterPro:Ribosomal_L22/L17_sf | InterPro:Ribosomal_L22_bac/chlpt-type | SUPFAM:SSF54843 |
| TIGRFAMs:TIGR01044 | UniParc:UPI0001615422 | : | : | : | : |
Description
50S ribosomal protein L22, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr11G15530_001]
Coordinates
chr11:-:17188580..17189162
Molecular Weight (calculated)
14686.1 Da
IEP (calculated)
10.758
GRAVY (calculated)
-0.302
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKNSSSGKE VKILAQHICS MSVFKARRVI DQIRGRSYEE TLMILELMPY RASYPILKLV YSAAANASHN MGLNEADSFI SEAKVNRSTI VKKLRPRARG
101: RSYPIKRPTC HITIVLKDKS KLFLDESRI
101: RSYPIKRPTC HITIVLKDKS KLFLDESRI
001: MIKKRKKKSY TEVYALGQYI SMSAHKARRV IDQIRGRSYE EALMILELMP YRGCYPIFKL VYSAAANASH NKGFKETNLV ISKAEVNQGN TVKKLKPRAR
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK
Arabidopsis Description
RPL2250S ribosomal protein L22, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56795]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.