Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G037290.1 | Barley | cytosol, mitochondrion | 97.32 | 97.32 |
| CAA33935 | Rice | cytosol, mitochondrion | 93.29 | 93.29 |
| TraesCS5A01G436400.1 | Wheat | mitochondrion | 85.91 | 92.75 |
| TraesCS2A01G241400.1 | Wheat | mitochondrion | 78.52 | 90.0 |
| TraesCS6A01G192200.1 | Wheat | mitochondrion | 81.88 | 82.43 |
| Os12t0488300-00 | Rice | mitochondrion | 77.18 | 78.23 |
| VIT_17s0000g02610.t01 | Wine grape | cytosol, mitochondrion | 20.81 | 56.36 |
| GSMUA_Achr11P... | Banana | cytosol | 48.32 | 55.81 |
| ATCG00810.1 | Thale cress | mitochondrion | 42.28 | 39.38 |
| CDX91812 | Canola | mitochondrion | 42.28 | 39.38 |
| CDY21180 | Canola | mitochondrion | 42.28 | 39.38 |
| CDY28604 | Canola | mitochondrion | 42.28 | 39.38 |
| KRG93170 | Soybean | mitochondrion | 38.26 | 28.79 |
| KRH56510 | Soybean | plastid | 38.26 | 27.27 |
Protein Annotations
| MapMan:17.7.2.1.20 | Gene3D:3.90.470.10 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | InterPro:IPR036394 |
| HAMAP:MF_01331_B | PFAM:PF00237 | ScanProsite:PS00464 | PANTHER:PTHR13501 | PANTHER:PTHR13501:SF7 | InterPro:Ribosomal_L22 |
| InterPro:Ribosomal_L22/L17_CS | InterPro:Ribosomal_L22/L17_sf | InterPro:Ribosomal_L22_bac/chlpt-type | SUPFAM:SSF54843 | TIGRFAMs:TIGR01044 | EnsemblPlantsGene:TraesCS3A01G431600 |
| EnsemblPlants:TraesCS3A01G431600.1 | TIGR:cd00336 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:672911486..672911935
Molecular Weight (calculated)
17605.3 Da
IEP (calculated)
11.234
GRAVY (calculated)
-0.266
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSFKLVKYI PRIKKKKSGL RKLARKVPTD RLLKFERVFK AQKRIPMSVF KAQRVLDEIH WCYYEETVMI LNLMPYRASY PILKLVYSAA ANATHYRDFD
101: KANLFITKAE VSMSTIMKKF RPRARGRSFP IKKSMCHITI VLKIVKKSK
101: KANLFITKAE VSMSTIMKKF RPRARGRSFP IKKSMCHITI VLKIVKKSK
001: MIKKRKKKSY TEVYALGQYI SMSAHKARRV IDQIRGRSYE EALMILELMP YRGCYPIFKL VYSAAANASH NKGFKETNLV ISKAEVNQGN TVKKLKPRAR
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK
Arabidopsis Description
RPL2250S ribosomal protein L22, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56795]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.