Factsheet for VIT_17s0000g02610.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G028100.1	Barley	cytosol, golgi, mitochondrion	45.45	43.86
GSMUA_Achr11P...	Banana	cytosol	78.18	33.33
TraesCS2B01G338000.1	Wheat	mitochondrion	56.36	27.43
HORVU7Hr1G100990.2	Barley	mitochondrion	45.45	26.88
ATCG00810.1	Thale cress	mitochondrion	76.36	26.25
CDX91812	Canola	mitochondrion	76.36	26.25
CDY21180	Canola	mitochondrion	76.36	26.25
CDY28604	Canola	mitochondrion	76.36	26.25
TraesCS2A01G241400.1	Wheat	mitochondrion	56.36	23.85
TraesCSU01G270200.1	Wheat	mitochondrion	58.18	23.36
TraesCS5D01G456700.1	Wheat	mitochondrion	58.18	23.36
TraesCS5D01G219900.1	Wheat	mitochondrion	58.18	23.36
TraesCS3B01G187800.1	Wheat	mitochondrion	58.18	23.36
TraesCS1D01G205200.1	Wheat	mitochondrion	58.18	23.36
TraesCS5D01G326900.1	Wheat	mitochondrion	56.36	22.46
TraesCS1D01G183400.1	Wheat	mitochondrion	58.18	21.77
AGP50794	Barley	cytosol, mitochondrion	58.18	21.48
TraesCS7D01G254800.1	Wheat	cytosol, mitochondrion	58.18	21.48
TraesCS6D01G175100.1	Wheat	plastid	58.18	21.48
HORVU6Hr1G037290.1	Barley	cytosol, mitochondrion	58.18	21.48
HORVU2Hr1G051410.1	Barley	cytosol, mitochondrion	58.18	21.48
TraesCS5A01G436400.1	Wheat	mitochondrion	52.73	21.01
HORVU5Hr1G064950.1	Barley	cytosol, mitochondrion	56.36	20.81
TraesCS3A01G431600.1	Wheat	cytosol, mitochondrion	56.36	20.81
HORVU7Hr1G065870.1	Barley	cytosol, mitochondrion	56.36	20.81
CAA33935	Rice	cytosol, mitochondrion	56.36	20.81
TraesCS6A01G192200.1	Wheat	mitochondrion	54.55	20.27
Os12t0488300-00	Rice	mitochondrion	52.73	19.73
TraesCS5B01G204300.1	Wheat	mitochondrion	49.09	19.42
Os07t0273150-00	Rice	cytosol	30.91	17.35
KRG93170	Soybean	mitochondrion	60.0	16.67
KRH56510	Soybean	plastid	61.82	16.27

Protein Annotations

Gene3D:3.90.470.10	MapMan:35.1	EntrezGene:4025022	wikigene:4025022	ProteinID:ABE47573	ProteinID:ABE47573.1
ProteinID:CCB43271	ProteinID:CCB43271.1	EMBL:DQ424856	UniProt:F6GSJ8	EMBL:FN594950	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005762	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0009987
GO:GO:0015934	GO:GO:0019538	GO:GO:0030529	InterPro:IPR036394	PFAM:PF00237	PANTHER:PTHR13501
PANTHER:PTHR13501:SF7	InterPro:Ribosomal_L22	InterPro:Ribosomal_L22/L17_sf	InterPro:Ribosomal_L22_bac/chlpt-type	SUPFAM:SSF54843	TIGR:TC56485
UniParc:UPI0002108F4D	ArrayExpress:VIT_17s0000g02610	EnsemblPlantsGene:VIT_17s0000g02610	EnsemblPlants:VIT_17s0000g02610.t01	unigene:Vvi.9814	unigene:Vvi.9881
EntrezGene:rpl22	wikigene:rpl22	:	:	:	:

Description

No Description!

Coordinates

chr17:+:2403469..2403800

Molecular Weight (calculated)

6366.0 Da

IEP (calculated)

10.445

GRAVY (calculated)

-0.078

Length

55 amino acids

Sequence
(BLAST)

1: MSAHKARRVL DQILGRSYRK TLTILELMPY RACYPIFKLI YIAAANAKHN MGLNE

Best Arabidopsis Sequence Match ( ATCG00810.1 )
(BLAST)

001: MIKKRKKKSY TEVYALGQYI SMSAHKARRV IDQIRGRSYE EALMILELMP YRGCYPIFKL VYSAAANASH NKGFKETNLV ISKAEVNQGN TVKKLKPRAR
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK

Arabidopsis Description

RPL2250S ribosomal protein L22, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56795]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.