CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21180	Canola	mitochondrion	100.0	100.0
CDX91812	Canola	mitochondrion	98.75	98.75
ATCG00810.1	Thale cress	mitochondrion	95.62	95.62
VIT_17s0000g02610.t01	Wine grape	cytosol, mitochondrion	26.25	76.36
GSMUA_Achr11P...	Banana	cytosol	51.88	64.34
HORVU4Hr1G028100.1	Barley	cytosol, golgi, mitochondrion	18.75	52.63
AGP50794	Barley	cytosol, mitochondrion	40.62	43.62
TraesCS7D01G254800.1	Wheat	cytosol, mitochondrion	40.62	43.62
TraesCS6D01G175100.1	Wheat	plastid	40.62	43.62
HORVU2Hr1G051410.1	Barley	cytosol, mitochondrion	40.62	43.62
HORVU6Hr1G037290.1	Barley	cytosol, mitochondrion	40.62	43.62
TraesCSU01G270200.1	Wheat	mitochondrion	36.88	43.07
TraesCS5D01G219900.1	Wheat	mitochondrion	36.88	43.07
TraesCS3B01G187800.1	Wheat	mitochondrion	36.88	43.07
TraesCS1D01G205200.1	Wheat	mitochondrion	36.88	43.07
HORVU7Hr1G065870.1	Barley	cytosol, mitochondrion	40.0	42.95
HORVU5Hr1G064950.1	Barley	cytosol, mitochondrion	40.0	42.95
TraesCS3A01G431600.1	Wheat	cytosol, mitochondrion	39.38	42.28
CAA33935	Rice	cytosol, mitochondrion	38.75	41.61
TraesCS5D01G326900.1	Wheat	mitochondrion	35.62	41.3
Os12t0488300-00	Rice	mitochondrion	37.5	40.82
TraesCS5A01G436400.1	Wheat	mitochondrion	35.0	40.58
TraesCS5D01G456700.1	Wheat	mitochondrion	34.38	40.15
TraesCS1D01G183400.1	Wheat	mitochondrion	35.62	38.78
TraesCS5B01G204300.1	Wheat	mitochondrion	33.12	38.13
TraesCS2B01G338000.1	Wheat	mitochondrion	25.62	36.28
TraesCS2A01G241400.1	Wheat	mitochondrion	28.75	35.38
TraesCS6A01G192200.1	Wheat	mitochondrion	31.88	34.46
KRG93170	Soybean	mitochondrion	42.5	34.34
KRH56510	Soybean	plastid	43.12	33.01
HORVU7Hr1G100990.2	Barley	mitochondrion	18.75	32.26
Os07t0273150-00	Rice	cytosol	16.25	26.53

Protein Annotations

MapMan:17.7.2.1.20	Gene3D:3.90.470.10	GO:A0A078GTV5	UniProt:A0A078GTV5	ProteinID:CDY21180.1	EnsemblPlants:CDY28604
ProteinID:CDY28604	ProteinID:CDY28604.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	GO:GO:0030529
EnsemblPlantsGene:GSBRNA2T00040621001	InterPro:IPR036394	HAMAP:MF_01331_B	PFAM:PF00237	ScanProsite:PS00464	PANTHER:PTHR13501
PANTHER:PTHR13501:SF7	InterPro:Ribosomal_L22	InterPro:Ribosomal_L22/L17_CS	InterPro:Ribosomal_L22/L17_sf	InterPro:Ribosomal_L22_bac/chlpt-type	SUPFAM:SSF54843
TIGRFAMs:TIGR01044	UniParc:UPI0004EE9B86	SEG:seg	:	:	:

Description

BnaA06g19340DBnaA01g34110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTV5]

Coordinates

chrLK032223:-:275928..276410

Molecular Weight (calculated)

18479.5 Da

IEP (calculated)

10.107

GRAVY (calculated)

-0.593

Length

160 amino acids

Sequence
(BLAST)

001: MIKKKKKKSY TSVYALGQYI SMSAHKARRV IDQIRGRSYE EALMILELMP YRGCYPIFKL VYSAAANASH NKGFKETNLV IRKAEVNQGN TVKKLNPRAR
101: GRSYPIKRST CHITIVLEDI SLYQQYEEYL MYLKKPGCSN ENINLTCYDT YSSGGPWDKK

Best Arabidopsis Sequence Match ( ATCG00810.1 )
(BLAST)

001: MIKKRKKKSY TEVYALGQYI SMSAHKARRV IDQIRGRSYE EALMILELMP YRGCYPIFKL VYSAAANASH NKGFKETNLV ISKAEVNQGN TVKKLKPRAR
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK

Arabidopsis Description

RPL2250S ribosomal protein L22, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56795]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.