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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AGP50794 Barley cytosol, mitochondrion 95.97 95.97
TraesCS6D01G175100.1 Wheat plastid 95.97 95.97
HORVU2Hr1G051410.1 Barley cytosol, mitochondrion 95.97 95.97
HORVU6Hr1G037290.1 Barley cytosol, mitochondrion 95.97 95.97
TraesCS7D01G254800.1 Wheat cytosol, mitochondrion 95.3 95.3
HORVU5Hr1G064950.1 Barley cytosol, mitochondrion 95.3 95.3
HORVU7Hr1G065870.1 Barley cytosol, mitochondrion 95.3 95.3
TraesCSU01G270200.1 Wheat mitochondrion 87.25 94.89
TraesCS5D01G219900.1 Wheat mitochondrion 86.58 94.16
TraesCS1D01G205200.1 Wheat mitochondrion 86.58 94.16
TraesCS3A01G431600.1 Wheat cytosol, mitochondrion 93.29 93.29
TraesCS3B01G187800.1 Wheat mitochondrion 85.23 92.7
TraesCS2B01G338000.1 Wheat mitochondrion 69.8 92.04
TraesCS5D01G326900.1 Wheat mitochondrion 85.23 92.03
TraesCS5D01G456700.1 Wheat mitochondrion 84.56 91.97
TraesCS5A01G436400.1 Wheat mitochondrion 84.56 91.3
TraesCS2A01G241400.1 Wheat mitochondrion 78.52 90.0
TraesCS1D01G183400.1 Wheat mitochondrion 85.23 86.39
TraesCS5B01G204300.1 Wheat mitochondrion 80.54 86.33
Os12t0488300-00 Rice mitochondrion 81.88 82.99
TraesCS6A01G192200.1 Wheat mitochondrion 80.54 81.08
HORVU7Hr1G100990.2 Barley mitochondrion 48.32 77.42
Os07t0273150-00 Rice cytosol 38.26 58.16
VIT_17s0000g02610.t01 Wine grape cytosol, mitochondrion 20.81 56.36
GSMUA_Achr11P... Banana cytosol 48.32 55.81
CDY28604 Canola mitochondrion 41.61 38.75
CDY21180 Canola mitochondrion 41.61 38.75
CDX91812 Canola mitochondrion 41.61 38.75
ATCG00810.1 Thale cress mitochondrion 41.61 38.75
KRG93170 Soybean mitochondrion 37.58 28.28
KRH56510 Soybean plastid 38.26 27.27
Protein Annotations
MapMan:17.7.2.1.20Gene3D:3.90.470.10EntrezGene:3131426ProteinID:AAA84594.1ProteinID:AAS46148.1ProteinID:ADD62862.1
ProteinID:AJC99353.1ProteinID:AJC99441.1UniProt:B9G372ProteinID:BAC10088.1ProteinID:BAD05515.1ProteinID:BAD31430.1
ProteinID:BAD33781.1ProteinID:BAD36258.1ProteinID:BAH94203.1EnsemblPlants:CAA33935EnsemblPlantsGene:CAA33935ProteinID:CAA33935
ProteinID:CAA33935.1ProteinID:EEE69569.1GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003735
GO:GO:0005198GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005762GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0015934GO:GO:0019538
GO:GO:0019843InterPro:IPR036394HAMAP:MF_01331_BRefSeq:NP_039425.1UniProt:P0C446PFAM:PF00237
ScanProsite:PS00464PANTHER:PTHR13501PANTHER:PTHR13501:SF7Reactome:R-HSA-156827Reactome:R-HSA-156902Reactome:R-HSA-1799339
Reactome:R-HSA-192823Reactome:R-HSA-2408557Reactome:R-HSA-5368286Reactome:R-HSA-5389840Reactome:R-HSA-5419276Reactome:R-HSA-6791226
Reactome:R-HSA-72689Reactome:R-HSA-72706Reactome:R-HSA-72764Reactome:R-HSA-975956Reactome:R-HSA-975957InterPro:Ribosomal_L22
InterPro:Ribosomal_L22/L17_CSInterPro:Ribosomal_L22/L17_sfInterPro:Ribosomal_L22_bac/chlpt-typeSUPFAM:SSF54843TIGRFAMs:TIGR01044UniParc:UPI00000013B9
Description
rpl22ribosomal protein L22
Coordinates
chrPt:-:80119..80568
Molecular Weight (calculated)
17684.2 Da
IEP (calculated)
11.530
GRAVY (calculated)
-0.412
Length
149 amino acids
Sequence
(BLAST)
001: MTSFKLVKYT PRIKKKKSGL RKLARKVPTD RLLKFERVFK AQKRIHMSVF KVQRVLDEIR WRYYEETVMI LNLMPYRASY PILKLVYSAA ANATHYRDFD
101: KANLFITKAE VSRSTIMNKF RPRARGRSSP IKKTMCHITI VLNIVKKSK
Best Arabidopsis Sequence Match ( ATCG00810.1 )
(BLAST)
001: MIKKRKKKSY TEVYALGQYI SMSAHKARRV IDQIRGRSYE EALMILELMP YRGCYPIFKL VYSAAANASH NKGFKETNLV ISKAEVNQGN TVKKLKPRAR
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK
Arabidopsis Description
RPL2250S ribosomal protein L22, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56795]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.