CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56510	Soybean	plastid	88.89	84.21
VIT_17s0000g02610.t01	Wine grape	cytosol, mitochondrion	16.67	60.0
GSMUA_Achr11P...	Banana	cytosol	32.32	49.61
ATCG00810.1	Thale cress	mitochondrion	35.86	44.38
CDX91812	Canola	mitochondrion	35.35	43.75
CDY28604	Canola	mitochondrion	34.34	42.5
CDY21180	Canola	mitochondrion	34.34	42.5
HORVU4Hr1G028100.1	Barley	cytosol, golgi, mitochondrion	11.62	40.35
TraesCSU01G270200.1	Wheat	mitochondrion	27.27	39.42
TraesCS5D01G219900.1	Wheat	mitochondrion	27.27	39.42
TraesCS3B01G187800.1	Wheat	mitochondrion	27.27	39.42
TraesCS1D01G205200.1	Wheat	mitochondrion	27.27	39.42
AGP50794	Barley	cytosol, mitochondrion	28.79	38.26
TraesCS7D01G254800.1	Wheat	cytosol, mitochondrion	28.79	38.26
TraesCS6D01G175100.1	Wheat	plastid	28.79	38.26
TraesCS3A01G431600.1	Wheat	cytosol, mitochondrion	28.79	38.26
HORVU6Hr1G037290.1	Barley	cytosol, mitochondrion	28.79	38.26
HORVU2Hr1G051410.1	Barley	cytosol, mitochondrion	28.79	38.26
TraesCS5D01G456700.1	Wheat	mitochondrion	26.26	37.96
CAA33935	Rice	cytosol, mitochondrion	28.28	37.58
HORVU7Hr1G065870.1	Barley	cytosol, mitochondrion	28.28	37.58
HORVU5Hr1G064950.1	Barley	cytosol, mitochondrion	28.28	37.58
TraesCS5A01G436400.1	Wheat	mitochondrion	25.76	36.96
TraesCS5D01G326900.1	Wheat	mitochondrion	25.76	36.96
TraesCS1D01G183400.1	Wheat	mitochondrion	26.77	36.05
Os12t0488300-00	Rice	mitochondrion	26.26	35.37
TraesCS5B01G204300.1	Wheat	mitochondrion	24.24	34.53
TraesCS6A01G192200.1	Wheat	mitochondrion	25.25	33.78
TraesCS2A01G241400.1	Wheat	mitochondrion	21.72	33.08
TraesCS2B01G338000.1	Wheat	mitochondrion	18.69	32.74
HORVU7Hr1G100990.2	Barley	mitochondrion	15.15	32.26
Os07t0273150-00	Rice	cytosol	12.12	24.49

Protein Annotations

MapMan:17.7.2.1.20	Gene3D:3.90.470.10	EMBL:ACUP02011541	EnsemblPlantsGene:GLYMA_19G001100	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005762	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	GO:GO:0030529	UniProt:I1N5M5	InterPro:IPR036394
EnsemblPlants:KRG93170	ProteinID:KRG93170	ProteinID:KRG93170.1	HAMAP:MF_01331_B	PFAM:PF00237	PANTHER:PTHR13501
PANTHER:PTHR13501:SF7	InterPro:Ribosomal_L22	InterPro:Ribosomal_L22/L17_sf	InterPro:Ribosomal_L22_bac/chlpt-type	SUPFAM:SSF54843	TIGRFAMs:TIGR01044
UniParc:UPI00023D9B7E	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:89169..91439

Molecular Weight (calculated)

21918.8 Da

IEP (calculated)

10.567

GRAVY (calculated)

-0.230

Length

198 amino acids

Sequence
(BLAST)

001: MAVNRPVLRV HENLPLALTV APHQFLPFKF TSVGIRCSPF NDKTLISIKP NTSHLNHDTL ACRFHAAQFA EQESNKYVEA YAVGRNIRMS ANKARRVIDQ
101: IRGSKYDETL MVLELMPYRA CEAILKIVFS AGANASNNLG LSKGSLVISK AEVNEGKTMK RVKPVARGRA HPIKKRTCHI TITVKGLPSE SVEEAKPA

Best Arabidopsis Sequence Match ( ATCG00810.1 )
(BLAST)

001: MIKKRKKKSY TEVYALGQYI SMSAHKARRV IDQIRGRSYE EALMILELMP YRGCYPIFKL VYSAAANASH NKGFKETNLV ISKAEVNQGN TVKKLKPRAR
101: GRSYPIKRST CHITIVLEDI SFYQQYEEYL MYLKKPGCSN ENRNLTCYDT YSSGGLWDKK

Arabidopsis Description

RPL2250S ribosomal protein L22, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56795]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.