Factsheet for AT4G04020.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029481.1-P	Field mustard	plastid	84.28	84.28
CDY71809	Canola	plastid	49.69	84.04
CDY16684	Canola	plastid	83.65	83.65
CDY21291	Canola	plastid	81.13	81.65
CDX90850	Canola	plastid	80.5	81.01
Bra000785.1-P	Field mustard	plastid	80.82	78.59
AT4G22240.1	Thale cress	plastid	74.53	76.45
CDX94540	Canola	plastid	34.28	73.15
GSMUA_Achr7P05510_001	Banana	cytosol	53.46	68.27
KRH11500	Soybean	plastid	59.75	62.09
PGSC0003DMT400043112	Potato	extracellular	62.26	60.74
KRH36517	Soybean	plastid	59.12	60.26
Solyc02g081170.2.1	Tomato	plastid	61.64	60.12
GSMUA_Achr3P12980_001	Banana	plastid	57.86	57.5
TraesCS5B01G162100.1	Wheat	plastid	54.4	55.45
TraesCS5A01G164600.1	Wheat	plastid	54.4	55.1
Os09t0133600-01	Rice	plastid	54.4	54.23
Zm00001d003470_P001	Maize	plastid	51.89	51.89
Zm00001d025574_P001	Maize	extracellular	50.94	51.59
EES12270	Sorghum	plastid	53.46	51.52
GSMUA_Achr4P20110_001	Banana	plastid	50.31	51.28
HORVU0Hr1G012460.1	Barley	cytosol, mitochondrion, nucleus	52.52	44.77
AT2G35490.1	Thale cress	plastid	39.62	33.51

Protein Annotations

MapMan:35.1	EntrezGene:825714	ProteinID:AAC28198.1	ProteinID:AEE82363.1	ArrayExpress:AT4G04020	EnsemblPlantsGene:AT4G04020
RefSeq:AT4G04020	TAIR:AT4G04020	RefSeq:AT4G04020-TAIR-G	EnsemblPlants:AT4G04020.1	TAIR:AT4G04020.1	EMBL:AY085330
EMBL:AY120766	EMBL:BT000148	ProteinID:CAB77870.1	Symbol:FIB	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006091	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009507
GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009628
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0010205	GO:GO:0010287	GO:GO:0010319
GO:GO:0015979	GO:GO:0016020	GO:GO:0031977	RefSeq:NP_192311.1	UniProt:O81439	InterPro:PAP/fibrillin_dom
PFAM:PF04755	PO:PO:0000293	PO:PO:0007131	PO:PO:0009001	PO:PO:0009025	PANTHER:PTHR31906
PANTHER:PTHR31906:SF7	UniParc:UPI00000AC371	:	:	:	:

Description

PAP1Probable plastid-lipid-associated protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81439]

Coordinates

chr4:+:1931883..1933950

Molecular Weight (calculated)

34950.3 Da

IEP (calculated)

5.246

GRAVY (calculated)

-0.268

Length

318 amino acids

Sequence
(BLAST)

001: MATVPLFTQF PCKTLNPSSS NTKHQSKSPI LLPINSINRR SEIGVSVHRP DFKIRATDID DEWGQDGVER VFASSSTVSV ADKAIESVEE TERLKRSLAD
101: SLYGTDRGLS VSSDTRAEIS ELITQLESKN PTPAPNEALF LLNGKWILAY TSFVGLFPLL SRRIEPLVKV DEISQTIDSD SFTVQNSVRF AGPFSTTSFS
201: TNAKFEIRSP KRVQIKFEQG VIGTPQLTDS IEIPESVEVL GQKIDLNPIK GLLTSVQDTA SSVARTISNQ PPLKFSLPSD NTQSWLLTTY LDKDLRISRG
301: DGGSVYVLIK EGSSLLNP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.