Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94382 | Canola | cytosol | 84.79 | 87.62 |
| Bra013945.1-P | Field mustard | cytosol | 85.25 | 87.06 |
| CDX89368 | Canola | cytosol | 85.25 | 86.85 |
| CDY42756 | Canola | cytosol | 81.57 | 85.71 |
| Bra019121.1-P | Field mustard | cytosol | 81.34 | 85.47 |
| CDX92752 | Canola | cytosol | 80.41 | 85.12 |
| Bra010441.1-P | Field mustard | cytosol | 82.72 | 85.07 |
| CDY50003 | Canola | nucleus | 80.18 | 84.88 |
| CDY14318 | Canola | nucleus | 82.49 | 84.83 |
| CDY50002 | Canola | cytosol | 33.18 | 84.21 |
| AT5G57050.1 | Thale cress | cytosol | 74.88 | 76.83 |
| AT2G29380.1 | Thale cress | nucleus | 34.79 | 41.71 |
| KRH19237 | Soybean | cytosol, nucleus, peroxisome | 50.23 | 40.67 |
| AT1G17550.1 | Thale cress | cytosol | 47.47 | 40.31 |
| AT1G72770.1 | Thale cress | cytosol | 47.47 | 40.31 |
| KRH37441 | Soybean | cytosol | 48.39 | 40.23 |
| KRH12454 | Soybean | cytosol | 48.85 | 40.23 |
| KRH02667 | Soybean | cytosol, nucleus, peroxisome | 49.77 | 40.15 |
| AT3G11410.1 | Thale cress | cytosol | 36.41 | 39.6 |
| PGSC0003DMT400046382 | Potato | cytosol | 47.93 | 38.24 |
| Solyc07g040990.2.1 | Tomato | cytosol | 46.54 | 37.69 |
| AT5G59220.1 | Thale cress | nucleus | 34.1 | 35.84 |
| AT1G07430.1 | Thale cress | nucleus | 35.94 | 35.29 |
| AT5G51760.1 | Thale cress | cytosol | 32.03 | 33.41 |
| AT3G63320.1 | Thale cress | plastid | 20.74 | 21.28 |
| AT3G63340.2 | Thale cress | golgi, plasma membrane | 22.58 | 9.12 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | PDB:3JRQ |
| PDB:3KDJ | PDB:3NMN | EntrezGene:828714 | Symbol:ABI1 | ProteinID:AEE85155.1 | EMBL:AK226529 |
| ArrayExpress:AT4G26080 | EnsemblPlantsGene:AT4G26080 | RefSeq:AT4G26080 | TAIR:AT4G26080 | RefSeq:AT4G26080-TAIR-G | EnsemblPlants:AT4G26080.1 |
| TAIR:AT4G26080.1 | EMBL:AY035073 | EMBL:AY142623 | Unigene:At.21332 | ProteinID:CAA55484.1 | ProteinID:CAB39673.1 |
| ProteinID:CAB79463.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009408 | GO:GO:0009409 | GO:GO:0009628 | GO:GO:0009719 |
| GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009787 | GO:GO:0009788 | GO:GO:0009987 | GO:GO:0010119 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019901 | GO:GO:0043169 | GO:GO:0046872 |
| InterPro:IPR001932 | InterPro:IPR036457 | RefSeq:NP_194338.1 | UniProt:P49597 | PFAM:PF00481 | PO:PO:0000013 |
| PO:PO:0000025 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PP2C | InterPro:PP2C_BS |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF373 |
| SMART:SM00332 | SUPFAM:SSF81606 | EMBL:U12856 | UniParc:UPI00000017FF | EMBL:X77116 | SEG:seg |
Description
ABI1Protein phosphatase 2C 56 [Source:UniProtKB/Swiss-Prot;Acc:P49597]
Coordinates
chr4:-:13219915..13222376
Molecular Weight (calculated)
47508.5 Da
IEP (calculated)
5.983
GRAVY (calculated)
-0.319
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEVSPAIAG PFRPFSETQM DFTGIRLGKG YCNNQYSNQD SENGDLMVSL PETSSCSVSG SHGSESRKVL ISRINSPNLN MKESAAADIV VVDISAGDEI
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.