Factsheet for AT5G57050.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38260	Canola	cytosol	86.52	86.73
Bra002766.1-P	Field mustard	cytosol	86.29	86.49
CDY54381	Canola	cytosol, mitochondrion, plastid	85.82	85.82
AT4G26080.1	Thale cress	cytosol, nucleus, plastid	76.83	74.88
AT2G29380.1	Thale cress	nucleus	35.93	41.99
AT1G17550.1	Thale cress	cytosol	49.17	40.7
AT1G72770.1	Thale cress	cytosol	49.17	40.7
KRH19237	Soybean	cytosol, nucleus, peroxisome	51.06	40.3
KRH37441	Soybean	cytosol	49.41	40.04
KRH12454	Soybean	cytosol	49.88	40.04
KRH02667	Soybean	cytosol, nucleus, peroxisome	50.83	39.96
PGSC0003DMT400046382	Potato	cytosol	49.65	38.6
AT3G11410.1	Thale cress	cytosol	36.17	38.35
Solyc07g040990.2.1	Tomato	cytosol	47.75	37.69
AT5G59220.1	Thale cress	nucleus	34.99	35.84
AT1G07430.1	Thale cress	nucleus	36.64	35.07
AT5G51760.1	Thale cress	cytosol	33.33	33.89
AT3G63320.1	Thale cress	plastid	20.57	20.57
AT3G63340.2	Thale cress	golgi, plasma membrane	23.88	9.4

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:11.1.2.1.1.2	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	PDB:3NMV
PDB:3UJK	PDB:3UJL	EntrezGene:835809	UniProt:A0A178UGB7	Symbol:ABI2	ProteinID:AED96839.1
ProteinID:AED96840.1	ArrayExpress:AT5G57050	EnsemblPlantsGene:AT5G57050	RefSeq:AT5G57050	TAIR:AT5G57050	RefSeq:AT5G57050-TAIR-G
EnsemblPlants:AT5G57050.1	TAIR:AT5G57050.1	EMBL:AY136415	Unigene:At.22051	ProteinID:BAA97035.1	EMBL:BT008860
ProteinID:CAA70163.1	ProteinID:CAA72538.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0005515	GO:GO:0006091	GO:GO:0006464	GO:GO:0006469	GO:GO:0006470
GO:GO:0006950	GO:GO:0006970	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009408	GO:GO:0009414	GO:GO:0009628	GO:GO:0009719	GO:GO:0009737	GO:GO:0009738
GO:GO:0009987	GO:GO:0010205	GO:GO:0015979	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	GO:GO:1902456	InterPro:IPR001932	InterPro:IPR036457	RefSeq:NP_001119448.1	RefSeq:NP_200515.1
UniProt:O04719	ProteinID:OAO92858.1	PFAM:PF00481	PO:PO:0000230	PO:PO:0000293	PO:PO:0007611
PO:PO:0007616	PO:PO:0009010	PO:PO:0009029	PO:PO:0009031	PO:PO:0009047	PO:PO:0025022
PO:PO:0025374	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF373	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00000014F8
EMBL:Y08965	SEG:seg	:	:	:	:

Description

ABI2AtABI2 [Source:UniProtKB/TrEMBL;Acc:A0A178UGB7]

Coordinates

chr5:+:23087122..23089628

Molecular Weight (calculated)

46308.9 Da

IEP (calculated)

6.258

GRAVY (calculated)

-0.338

Length

423 amino acids

Sequence
(BLAST)

001: MDEVSPAVAV PFRPFTDPHA GLRGYCNGES RVTLPESSCS GDGAMKDSSF EINTRQDSLT SSSSAMAGVD ISAGDEINGS DEFDPRSMNQ SEKKVLSRTE
101: SRSLFEFKCV PLYGVTSICG RRPEMEDSVS TIPRFLQVSS SSLLDGRVTN GFNPHLSAHF FGVYDGHGGS QVANYCRERM HLALTEEIVK EKPEFCDGDT
201: WQEKWKKALF NSFMRVDSEI ETVAHAPETV GSTSVVAVVF PTHIFVANCG DSRAVLCRGK TPLALSVDHK PDRDDEAARI EAAGGKVIRW NGARVFGVLA
301: MSRSIGDRYL KPSVIPDPEV TSVRRVKEDD CLILASDGLW DVMTNEEVCD LARKRILLWH KKNAMAGEAL LPAEKRGEGK DPAAMSAAEY LSKMALQKGS
401: KDNISVVVVD LKGIRKFKSK SLN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.