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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX74819
CDX93223
CDX93225
CDY07040
CDY07041
CDY20501
CDY24941
CDY60996

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G08590.1 CDX74819 AT2G39940.1 14749489
AT5G08590.1 CDX93223 AT2G39940.1 14749489
AT5G08590.1 CDX93225 AT2G39940.1 14749489
AT5G08590.1 CDY07040 AT2G39940.1 14749489
AT5G08590.1 CDY07041 AT2G39940.1 14749489
AT5G08590.1 CDY20501 AT2G39940.1 14749489
AT5G08590.1 CDY24941 AT2G39940.1 14749489
AT5G08590.1 CDY60996 AT2G39940.1 14749489
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009354.1-P Field mustard cytosol 99.73 98.92
CDY21553 Canola cytosol 98.09 95.49
AT5G08590.1 Thale cress cytosol 90.46 94.05
CDX78346 Canola cytosol 94.28 93.51
CDX81116 Canola cytosol 92.92 92.16
GSMUA_Achr11P... Banana cytosol 16.35 90.91
CDX84430 Canola cytosol 85.29 88.92
CDY41527 Canola cytosol 85.83 88.24
KRH59681 Soybean endoplasmic reticulum 77.93 81.48
KRH41015 Soybean endoplasmic reticulum 77.66 81.2
KRH54011 Soybean cytosol 75.2 79.77
VIT_07s0031g03210.t01 Wine grape cytosol 77.11 79.72
KRH63934 Soybean endoplasmic reticulum 75.75 79.66
Solyc05g056550.2.1 Tomato cytosol 76.29 78.65
PGSC0003DMT400060263 Potato cytosol 76.57 78.49
CDY46190 Canola cytosol 75.2 78.41
Os04t0432000-02 Rice cytosol 74.66 76.32
TraesCS2A01G303900.1 Wheat cytosol 74.11 76.19
TraesCS2B01G320500.1 Wheat cytosol 74.11 76.19
TraesCS2D01G302500.1 Wheat cytosol, golgi 74.11 76.19
CDY34860 Canola cytosol 74.11 76.19
CDY20973 Canola cytosol 73.3 75.99
HORVU2Hr1G075470.2 Barley cytosol 73.84 75.91
CDY34668 Canola cytosol 74.39 75.62
EES06943 Sorghum cytosol 74.66 75.27
CDX97923 Canola cytosol 74.11 75.14
CDY72554 Canola cytosol 58.58 74.39
GSMUA_Achr11P... Banana cytosol 56.4 74.19
Os02t0551100-01 Rice plasma membrane 72.75 73.15
KXG26327 Sorghum cytosol 73.3 71.35
CDX89537 Canola cytosol 64.58 70.54
CDX88435 Canola cytosol 54.77 70.53
CDY38921 Canola cytosol 64.85 69.79
CDY68287 Canola cytosol 20.98 69.37
CDX87456 Canola cytosol 58.04 66.77
CDY20594 Canola cytosol 55.59 66.45
CDX79254 Canola cytosol 61.85 66.37
CDY19332 Canola cytosol 74.39 65.78
CDX69016 Canola cytosol 64.31 65.19
CDX75391 Canola cytosol 63.49 64.54
CDX69364 Canola cytosol 60.22 63.69
CDY12785 Canola cytosol 62.4 63.26
CDY01456 Canola cytosol 62.4 63.26
CDY23007 Canola cytosol 59.4 60.39
CDY02082 Canola cytosol 59.4 60.39
CDX97922 Canola cytosol 38.69 57.96
CDY31613 Canola cytosol 21.53 56.83
CDY68254 Canola cytosol 29.16 53.23
CDY52825 Canola plasma membrane 22.07 48.5
CDY03768 Canola cytosol 75.75 47.2
Zm00001d042188_P001 Maize plastid 23.71 43.5
CDX68023 Canola cytosol 61.85 36.26
KRH30137 Soybean extracellular, plasma membrane 11.72 35.83
Zm00001d047445_P001 Maize plastid 16.89 29.25
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.5.2Gene3D:3.30.200.20GO:A0A078BYY0EnsemblPlants:CDX69936ProteinID:CDX69936
ProteinID:CDX69936.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00136014001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR24343PANTHER:PTHR24343:SF161InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EF4A8ESEG:seg:::
Description
BnaA10g22850D
Coordinates
chrLK031790:-:2409866..2412349
Molecular Weight (calculated)
41999.9 Da
IEP (calculated)
6.039
GRAVY (calculated)
-0.535
Length
367 amino acids
Sequence
(BLAST)
001: MDKYEVVKDL GTGNFGVARL LRHKDTKELV AMKYIERGRK IDENVAREII NHRSLKHPNI IRFKEASFVI LTPTHLAIVM EYASGGELFE RICTAGRFSE
101: AEARYFFQQL ICGVDYCHSL QICHRDLKLE NTLLDGSPAP LLKICDFGYS KSSILHSRPK STVGTPAYIA PEVLSRREYD GKHADVWSCG VTLYVMLVGA
201: YPFEDPNDPK NFRKTIQRIM AIQYKIPDYV HISQECKHLL SRIFVTNPAK RITLKEIKNH PWYLKNLPKE LLESAQAVYY KRDNTSYSLQ SVEDIMKIVG
301: EARNPASSSS ISKSLGSGAG EEEEEEDVEA EVEEEVEEEE EEDEYEKHVK EAHSSIQEPH EALKEKK
Best Arabidopsis Sequence Match ( AT5G08590.1 )
(BLAST)
001: MDKYDVVKDL GAGNFGVARL LRHKDTKELV AMKYIERGRK IDENVAREII NHRSLKHPNI IRFKEVILTP THLAIVMEYA SGGELFDRIC TAGRFSEAEA
101: RYFFQQLICG VDYCHSLQIC HRDLKLENTL LDGSPAPLLK ICDFGYSKSS ILHSRPKSTV GTPAYIAPEV LSRREYDGKH ADVWSCGVTL YVMLVGAYPF
201: EDPNDPKNFR KTIQRIMAVQ YKIPDYVHIS QECKHLLSRI FVTNSAKRIT LKEIKNHPWY LKNLPKELLE SAQAAYYKRD TSFSLQSVED IMKIVGEARN
301: PAPSTSAVKS SGSGADEEEE EDVEAEVEEE EDDEDEYEKH VKEAQSCQES DKA
Arabidopsis Description
SRK2GSRK2G [Source:UniProtKB/TrEMBL;Acc:A0A178UA36]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.