Factsheet for Zm00001d047445_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042188_P001	Maize	plastid	65.57	69.5
Zm00001d029975_P003	Maize	cytosol, extracellular	35.85	22.82
GSMUA_Achr11P...	Banana	cytosol	29.25	22.22
Zm00001d024775_P002	Maize	cytosol	10.85	21.3
KRH30137	Soybean	extracellular, plasma membrane	11.79	20.83
CDX84430	Canola	cytosol	29.72	17.9
Bra038652.1-P	Field mustard	cytosol	29.72	17.65
CDY41527	Canola	cytosol	29.72	17.65
VIT_07s0031g03210.t01	Wine grape	cytosol	28.77	17.18
Zm00001d022179_P001	Maize	cytosol	27.83	17.1
PGSC0003DMT400060263	Potato	cytosol	28.77	17.04
Zm00001d050723_P001	Maize	cytosol	29.25	17.03
Zm00001d016783_P001	Maize	cytosol	29.25	17.03
Zm00001d047220_P003	Maize	cytosol	28.3	16.95
CDX69936	Canola	cytosol	29.25	16.89
Zm00001d003659_P002	Maize	extracellular, plasma membrane	28.3	16.85
Zm00001d013736_P001	Maize	cytosol	28.77	16.85
Zm00001d026690_P001	Maize	cytosol	28.77	16.8
Zm00001d033339_P002	Maize	cytosol, extracellular	28.77	16.76
Bra009354.1-P	Field mustard	cytosol	29.25	16.76
Solyc05g056550.2.1	Tomato	cytosol	27.83	16.57
CDY21553	Canola	cytosol	29.25	16.45
Zm00001d013201_P003	Maize	cytosol	29.25	16.32
Zm00001d012263_P002	Maize	cytosol	28.77	16.22
CDX81116	Canola	cytosol	28.3	16.22
CDX78346	Canola	cytosol	28.3	16.22
Zm00001d038326_P003	Maize	cytosol	27.36	16.16
Bra006010.1-P	Field mustard	cytosol	28.3	16.13
Zm00001d034161_P003	Maize	cytosol	29.72	15.79
Zm00001d042695_P002	Maize	cytosol	28.3	15.31
Zm00001d003758_P001	Maize	extracellular, mitochondrion, plasma membrane	6.6	13.46
Zm00001d020262_P003	Maize	cytosol	3.77	10.96
Zm00001d011604_P003	Maize	mitochondrion	16.04	7.16
AT4G11373.1	Thale cress	cytosol	3.77	7.08
GSMUA_Achr11P...	Banana	cytosol	1.42	4.55

Protein Annotations

EnsemblPlants:Zm00001d047445_P001	EnsemblPlants:Zm00001d047445_T001	EnsemblPlantsGene:Zm00001d047445	Gene3D:1.10.510.10	InterPro:Kinase-like_dom_sf	PANTHER:PTHR24343
PANTHER:PTHR24343:SF214	ProteinID:AQL06456.1	SEG:seg	SUPFAM:SSF56112	UniParc:UPI0008439C10	UniProt:A0A1D6P9I6
MapMan:50.2.7	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:130356914..130358624

Molecular Weight (calculated)

23244.2 Da

IEP (calculated)

4.461

GRAVY (calculated)

-0.515

Length

212 amino acids

Sequence
(BLAST)

001: MLGSPRRSPS PSSSCGDETR MSQAMSSSII NSWNSSIHSP RGSFQKRVAD VWSCGVTLYV MLVGSYPFED PEDPRNFRKT ISQFQCLLCL AENSWRVILH
101: PGLCESVFRL QTPSVSDIRC RSFKEGHDPT DKASPVVPED PPEGDLGEGE GQLQGRGCRR AGAAAQAVDK IMRIVEEAKT PGDMSKVVDP ALLAEMAELE
201: SDEEEADTDD TY

Best Arabidopsis Sequence Match ( AT1G60940.1 )
(BLAST)

001: MDKYELVKDI GAGNFGVARL MRVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THIAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSMPKSTV GTPAYIAPEV LSRGEYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFK KTIQRIMAVK YKIPDYVHIS QDCKHLLSRI FVTNSNKRIT IGDIKKHPWF LKNLPRELTE IAQAAYFRKE NPTFSLQSVE EIMKIVEEAK
301: TPARVSRSIG AFGWGGGEDA EGKEEDAEEE VEEVEEEEDE EDEYDKTVKQ VHASMGEVRV S

Arabidopsis Description

SRK2BSerine/threonine-protein kinase SRK2B [Source:UniProtKB/Swiss-Prot;Acc:Q9C958]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.