Factsheet for Zm00001d034161_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

cytosol: 21638061
nucleus: 21638061
plasma membrane: 21638061
cytosol: 29344831
nucleus: 29344831
cytosol: 30160823
nucleus: 30160823

gfp PMID: 30160823 doi

Q Wu, M Wang, J Shen, D Chen, Y Zheng, W Zhang

Key Laboratory of Plant Development and Environmental Adaption Biology, Ministry of Education; School of Life Science, Shandong University, Tsingtao 266237, China.

gfp PMID: 21638061 doi

S Ying, DF Zhang, HY Li, YH Liu, YS Shi, YC Song, TY Wang, Y Li

College of Biological Sciences, China Agricultural University, Beijing 100193, China.

gfp PMID: 29344831 doi

YG Wang, FL Fu, HQ Yu, T Hu, YY Zhang, Y Tao, JK Zhu, Y Zhao, WC Li

Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d030045_P001
Zm00001d047037_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	Zm00001d030045_P001	AT4G17870.1	19874541
AT5G66880.1	Zm00001d047037_P001	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93398	Sorghum	cytosol	89.22	97.27
Zm00001d013201_P003	Maize	cytosol	88.22	92.63
HORVU5Hr1G097630.1	Barley	cytosol	84.96	92.62
TraesCS5D01G411900.1	Wheat	cytosol	84.46	92.08
TraesCS5B01G406400.1	Wheat	cytosol	84.46	92.08
TraesCS5A01G401700.1	Wheat	cytosol	84.46	92.08
Os03t0764800-01	Rice	plasma membrane	84.71	91.11
GSMUA_Achr4P28190_001	Banana	cytosol	77.44	85.12
Zm00001d013736_P001	Maize	cytosol	77.19	85.08
KRH76943	Soybean	cytosol, extracellular, plasma membrane	12.03	84.21
Zm00001d033339_P002	Maize	cytosol, extracellular	75.94	83.24
GSMUA_Achr2P13360_001	Banana	cytosol	75.69	82.74
GSMUA_Achr4P23200_001	Banana	cytosol	75.44	82.02
Solyc02g090390.2.1	Tomato	cytosol	72.18	81.82
KRH57751	Soybean	nucleus	71.18	78.89
VIT_07s0197g00080.t01	Wine grape	cytosol	71.18	78.67
KRH04679	Soybean	nucleus, plastid	70.93	78.61
KRH28516	Soybean	cytosol	70.18	77.99
AT5G66880.1	Thale cress	cytosol	70.18	77.56
KRH76942	Soybean	cytosol	58.4	77.15
CDY12785	Canola	cytosol	69.92	77.07
CDY01456	Canola	cytosol	69.92	77.07
Bra012113.1-P	Field mustard	cytosol	68.67	76.75
CDY23007	Canola	cytosol	68.42	75.62
CDY02082	Canola	cytosol	68.17	75.35
Bra012897.1-P	Field mustard	cytosol	68.17	75.35
AT3G50500.2	Thale cress	cytosol	68.67	74.25
Zm00001d003758_P001	Maize	extracellular, mitochondrion, plasma membrane	18.55	71.15
KRH28215	Soybean	cytosol, plastid, vacuole	21.55	71.07
Zm00001d024775_P002	Maize	cytosol	18.8	69.44
Zm00001d022179_P001	Maize	cytosol	58.65	67.83
Zm00001d047220_P003	Maize	cytosol	59.15	66.67
Zm00001d029975_P003	Maize	cytosol, extracellular	54.89	65.77
Zm00001d003659_P002	Maize	extracellular, plasma membrane	56.64	63.48
Zm00001d050723_P001	Maize	cytosol	57.89	63.46
Zm00001d016783_P001	Maize	cytosol	57.14	62.64
Zm00001d012263_P002	Maize	cytosol	58.15	61.7
Zm00001d038326_P003	Maize	cytosol	55.39	61.56
Zm00001d026690_P001	Maize	cytosol	55.39	60.88
Zm00001d042695_P002	Maize	cytosol	58.4	59.44
Zm00001d020262_P003	Maize	cytosol	9.77	53.42
CDY52825	Canola	plasma membrane	21.8	52.1
Zm00001d042188_P001	Maize	plastid	20.8	41.5
Zm00001d047445_P001	Maize	plastid	15.79	29.72
Zm00001d011604_P003	Maize	mitochondrion	31.58	26.53

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100283283	MapMan:18.4.5.2	Gene3D:3.30.200.20	UniProt:A0A1D6L5V1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM09693.1
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343
PANTHER:PTHR24343:SF162	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0008439D35	EnsemblPlantsGene:Zm00001d034161	EnsemblPlants:Zm00001d034161_P003	EnsemblPlants:Zm00001d034161_T003	SEG:seg	:

Description

SnRK2 serine threonine protein kinase8 SnRK2 serine threonine protein kinase8

Coordinates

chr1:+:285417447..285425538

Molecular Weight (calculated)

45195.9 Da

IEP (calculated)

4.611

GRAVY (calculated)

-0.301

Length

399 amino acids

Sequence
(BLAST)

001: MAGPAPDRAA LTVGPGMDMP IMHDSDRYEL VRDIGSGNFG VARLMRDRRT SELVAVKYIE RGEKIDENVQ REIINHRSLK HPNIIRFKEV ILTPTHLAIV
101: MEYASGGELF ERICKNVRFS EDEARYFFQQ LISGVSYCHS MQVCHRDLKL ENTLLDGSDA PRLKICDFGY SKSSVLHSQP KSTVGTPAYI APEVLLKKEY
201: DGKVLCSLSG YLLYEESFSS PMDLFTTKQI ADVWSCGVTL YVMVVGAYPF EDPEEPKNFR KTIQVIFFFQ HGYKLNAQEC THNVNISPEC RHLISRIFVG
301: DPATRITIPE IRNHSWFLKN LPADLMDDDS MSNQYEEPDQ PMQTMDQIMQ ILTEATIPPA CSRSINVLAD GLDMDDDMDD LDSDSDLDVD SSGEIVYAM

Best Arabidopsis Sequence Match ( AT3G50500.1 )
(BLAST)

001: MDPATNSPIM PIDLPIMHDS DRYDFVKDIG SGNFGVARLM TDRVTKELVA VKYIERGEKI DENVQREIIN HRSLRHPNIV RFKEVILTPS HLAIVMEYAA
101: GGELYERICN AGRFSEDEAR FFFQQLISGV SYCHAMQICH RDLKLENTLL DGSPAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEIL LRQEYDGKLA
201: DVWSCGVTLY VMLVGAYPFE DPQEPRDYRK TIQRILSVTY SIPEDLHLSP ECRHLISRIF VADPATRITI PEITSDKWFL KNLPGDLMDE NRMGSQFQEP
301: EQPMQSLDTI MQIISEATIP TVRNRCLDDF MADNLDLDDD MDDFDSESEI DVDSSGEIVY AL

Arabidopsis Description

SPK-2-2SNF1-related protein kinase 2.2 [Source:UniProtKB/TrEMBL;Acc:F4J0N1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.