Factsheet for Zm00001d033339_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d030045_P001
Zm00001d047037_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	Zm00001d030045_P001	AT4G17870.1	19874541
AT5G66880.1	Zm00001d047037_P001	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91234	Sorghum	cytosol	96.7	97.24
Zm00001d013736_P001	Maize	cytosol	94.51	95.03
Os03t0610900-01	Rice	cytosol	93.41	93.92
TraesCS4D01G078100.2	Wheat	cytosol	93.13	93.91
TraesCS4B01G079300.1	Wheat	cytosol	93.13	93.91
TraesCS4A01G235600.2	Wheat	cytosol	93.13	93.91
HORVU4Hr1G013540.3	Barley	cytosol	93.13	93.91
GSMUA_Achr4P28190_001	Banana	cytosol	87.91	88.15
GSMUA_Achr2P13360_001	Banana	cytosol	85.71	85.48
GSMUA_Achr4P23200_001	Banana	cytosol	85.99	85.29
Zm00001d013201_P003	Maize	cytosol	84.62	81.05
Solyc02g090390.2.1	Tomato	cytosol	78.3	80.97
KRH57751	Soybean	nucleus	78.57	79.44
KRH04679	Soybean	nucleus, plastid	78.3	79.17
AT5G66880.1	Thale cress	cytosol	78.3	78.95
VIT_07s0197g00080.t01	Wine grape	cytosol	78.3	78.95
CDY12785	Canola	cytosol	78.3	78.73
CDY01456	Canola	cytosol	78.3	78.73
Bra012113.1-P	Field mustard	cytosol	77.2	78.71
KRH76942	Soybean	cytosol	64.56	77.81
KRH28516	Soybean	cytosol	76.37	77.44
KRH76943	Soybean	cytosol, extracellular, plasma membrane	12.09	77.19
Zm00001d034161_P003	Maize	cytosol	83.24	75.94
CDY23007	Canola	cytosol	75.27	75.9
CDY02082	Canola	cytosol	75.27	75.9
Bra012897.1-P	Field mustard	cytosol	75.27	75.9
AT3G50500.2	Thale cress	cytosol	75.82	74.8
KRH28215	Soybean	cytosol, plastid, vacuole	24.18	72.73
Zm00001d024775_P002	Maize	cytosol	21.15	71.3
Zm00001d022179_P001	Maize	cytosol	66.48	70.14
Zm00001d047220_P003	Maize	cytosol	67.31	69.21
Zm00001d029975_P003	Maize	cytosol, extracellular	62.09	67.87
Zm00001d003758_P001	Maize	extracellular, mitochondrion, plasma membrane	19.23	67.31
Zm00001d003659_P002	Maize	extracellular, plasma membrane	64.29	65.73
Zm00001d050723_P001	Maize	cytosol	65.38	65.38
Zm00001d016783_P001	Maize	cytosol	64.56	64.56
Zm00001d038326_P003	Maize	cytosol	62.36	63.23
Zm00001d012263_P002	Maize	cytosol	65.11	63.03
Zm00001d020262_P003	Maize	cytosol	12.64	63.01
Zm00001d026690_P001	Maize	cytosol	62.36	62.53
Zm00001d042695_P002	Maize	cytosol	65.38	60.71
CDY52825	Canola	plasma membrane	24.18	52.69
Zm00001d042188_P001	Maize	plastid	24.45	44.5
Zm00001d011604_P003	Maize	mitochondrion	38.19	29.26
Zm00001d047445_P001	Maize	plastid	16.76	28.77

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100191280	MapMan:18.4.5.2	MapMan:26.2.1.3	Gene3D:3.30.200.20	UniProt:B4FQ40
EMBL:BT039228	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	ProteinID:ONM07266.1	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF203	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00017B7994	EnsemblPlantsGene:Zm00001d033339	EnsemblPlants:Zm00001d033339_P002	EnsemblPlants:Zm00001d033339_T002
SEG:seg	:	:	:	:	:

Description

Serine/threonine-protein kinase SRK2E

Coordinates

chr1:+:259579982..259583071

Molecular Weight (calculated)

40862.7 Da

IEP (calculated)

4.568

GRAVY (calculated)

-0.305

Length

364 amino acids

Sequence
(BLAST)

001: MDRAALTVGP GMDMPIMHDG DRYELVRDIG SGNFGVARLM RNRADGQLVA VKYIDRGEKI DENVQREIIN HRSLRHPNII RFKEVILTPT HLAIVMEYAS
101: GGELFERICN AGRFSEDEAR FFFQQLISGV SYCHSMQVCH RDLKLENTLL DGSTAPRVKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEVL LKKEYDGKVA
201: DVWSCGVTLY VMLVGAYPFE DPDEPKNFRK TIQRILGVQY SVPDYVHISP ECQDLISRIF VANPSTRITM PEIRSHPWFL KNLPADLVDD SATTTSKQYE
301: EPEQPMQGMD EIMQILGEAT IPAAGSRGLN QFLNDGLDLD DDMEDLDSDA DLDLESSGEI VYAM

Best Arabidopsis Sequence Match ( AT5G66880.1 )
(BLAST)

001: MDRAPVTTGP LDMPIMHDSD RYDFVKDIGS GNFGVARLMR DKLTKELVAV KYIERGDKID ENVQREIINH RSLRHPNIVR FKEVILTPTH LAIIMEYASG
101: GELYERICNA GRFSEDEARF FFQQLLSGVS YCHSMQICHR DLKLENTLLD GSPAPRLKIC DFGYSKSSVL HSQPKSTVGT PAYIAPEVLL RQEYDGKIAD
201: VWSCGVTLYV MLVGAYPFED PEEPRDYRKT IQRILSVKYS IPDDIRISPE CCHLISRIFV ADPATRISIP EIKTHSWFLK NLPADLMNES NTGSQFQEPE
301: QPMQSLDTIM QIISEATIPA VRNRCLDDFM TDNLDLDDDM DDFDSESEID IDSSGEIVYA L

Arabidopsis Description

SRK2ISerine/threonine-protein kinase SRK2I [Source:UniProtKB/Swiss-Prot;Acc:Q39193]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.