Factsheet for TraesCS4A01G235600.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G191700.1
TraesCS1B01G206600.1
TraesCS1D01G195300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	TraesCS1A01G191700.1	AT4G17870.1	19874541
AT5G66880.1	TraesCS1B01G206600.1	AT4G17870.1	19874541
AT5G66880.1	TraesCS1D01G195300.1	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G078100.2	Wheat	cytosol	100.0	100.0
HORVU4Hr1G013540.3	Barley	cytosol	100.0	100.0
TraesCS4B01G079300.1	Wheat	cytosol	99.72	99.72
Os03t0610900-01	Rice	cytosol	96.12	95.86
EER91234	Sorghum	cytosol	96.12	95.86
Zm00001d013736_P001	Maize	cytosol	94.46	94.2
Zm00001d033339_P002	Maize	cytosol, extracellular	93.91	93.13
GSMUA_Achr4P28190_001	Banana	cytosol	89.75	89.26
TraesCS5A01G401700.1	Wheat	cytosol	87.81	86.61
GSMUA_Achr2P13360_001	Banana	cytosol	86.7	85.75
TraesCS5A01G069500.1	Wheat	cytosol	84.76	85.0
GSMUA_Achr4P23200_001	Banana	cytosol	85.87	84.47
Solyc02g090390.2.1	Tomato	cytosol	80.06	82.1
AT5G66880.1	Thale cress	cytosol	80.61	80.61
KRH04679	Soybean	nucleus, plastid	80.06	80.28
KRH57751	Soybean	nucleus	80.06	80.28
CDY01456	Canola	cytosol	80.33	80.11
CDY12785	Canola	cytosol	80.33	80.11
Bra012113.1-P	Field mustard	cytosol	78.95	79.83
VIT_07s0197g00080.t01	Wine grape	cytosol	79.78	79.78
KRH76942	Soybean	cytosol	66.48	79.47
KRH28516	Soybean	cytosol	78.67	79.11
KRH76943	Soybean	cytosol, extracellular, plasma membrane	12.19	77.19
CDY23007	Canola	cytosol	77.01	77.01
Bra012897.1-P	Field mustard	cytosol	77.01	77.01
CDY02082	Canola	cytosol	77.01	77.01
AT3G50500.2	Thale cress	cytosol	78.12	76.42
KRH28215	Soybean	cytosol, plastid, vacuole	24.38	72.73
TraesCS2A01G493800.1	Wheat	cytosol	68.42	72.22
TraesCS2A01G163800.1	Wheat	cytosol	69.25	70.82
TraesCS2A01G303900.1	Wheat	cytosol	66.2	66.95
TraesCS7A01G539000.2	Wheat	cytosol	54.02	66.1
TraesCS1A01G215900.1	Wheat	cytosol	62.33	65.79
TraesCS3A01G381100.1	Wheat	cytosol	64.54	64.19
TraesCS1A01G270800.1	Wheat	cytosol	63.43	63.61
TraesCS2A01G566700.1	Wheat	cytosol	63.43	58.57
CDY52825	Canola	plasma membrane	24.93	53.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF162
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4A01G235600
EnsemblPlants:TraesCS4A01G235600.2	TIGR:cd14662	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:544198527..544200845

Molecular Weight (calculated)

40649.5 Da

IEP (calculated)

4.568

GRAVY (calculated)

-0.278

Length

361 amino acids

Sequence
(BLAST)

001: MDRAALTVGP GMDMPIMHDG DRYELVKDIG SGNFGVARLM RNRADGQLVA VKYIERGEKI DENVQREIIN HRSLRHPNII RFKEVILTPT HLAIVMEYAS
101: GGELFERICN AGRFSEDEAR FFFQQLLSGV SYCHSMQVCH RDLKLENTLL DGSTAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEVL LKKEYDGKIA
201: DVWSCGVTLY VMLVGAYPFE DPDEPKNFRK TIQRILSVQY SIPDYVHISS ECRDLIAKIF VGNPATRITI PEIRNHPWFL KNLPADLVDD STMSSQYEEP
301: EQPMQSMDEI MQILAEATIP AAGSRINQFL NDGLDLDDDM DDLDSDADLD VESSGEIVYA M

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.