Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G191700.1 | |
| TraesCS1B01G206600.1 | |
| TraesCS1D01G195300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66880.1 | TraesCS1A01G191700.1 | AT4G17870.1 | 19874541 |
| AT5G66880.1 | TraesCS1B01G206600.1 | AT4G17870.1 | 19874541 |
| AT5G66880.1 | TraesCS1D01G195300.1 | AT4G17870.1 | 19874541 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G011570.1 | Barley | cytosol | 97.78 | 98.6 |
| TraesCS5B01G075800.1 | Wheat | cytosol | 98.33 | 97.52 |
| TraesCS5D01G081700.1 | Wheat | cytosol | 98.33 | 97.25 |
| HORVU5Hr1G018340.2 | Barley | cytosol | 97.78 | 94.88 |
| Os12t0586100-01 | Rice | cytosol | 86.67 | 86.43 |
| TraesCS4A01G235600.2 | Wheat | cytosol | 85.0 | 84.76 |
| GSMUA_Achr4P28190_001 | Banana | cytosol | 84.17 | 83.47 |
| EES17292 | Sorghum | cytosol | 83.06 | 82.14 |
| GSMUA_Achr2P13360_001 | Banana | cytosol | 82.5 | 81.37 |
| GSMUA_Achr4P23200_001 | Banana | cytosol | 81.11 | 79.56 |
| TraesCS5A01G401700.1 | Wheat | cytosol | 80.0 | 78.69 |
| VIT_07s0197g00080.t01 | Wine grape | cytosol | 76.67 | 76.45 |
| Solyc02g090390.2.1 | Tomato | cytosol | 74.72 | 76.42 |
| KRH76942 | Soybean | cytosol | 63.89 | 76.16 |
| AT5G66880.1 | Thale cress | cytosol | 75.56 | 75.35 |
| KRH57751 | Soybean | nucleus | 74.44 | 74.44 |
| KRH28516 | Soybean | cytosol | 73.89 | 74.09 |
| KRH04679 | Soybean | nucleus, plastid | 73.89 | 73.89 |
| CDY12785 | Canola | cytosol | 74.17 | 73.76 |
| CDY01456 | Canola | cytosol | 74.17 | 73.76 |
| CDY23007 | Canola | cytosol | 73.61 | 73.41 |
| Bra012897.1-P | Field mustard | cytosol | 73.61 | 73.41 |
| CDY02082 | Canola | cytosol | 73.61 | 73.41 |
| Bra012113.1-P | Field mustard | cytosol | 72.78 | 73.39 |
| AT3G50500.2 | Thale cress | cytosol | 73.33 | 71.54 |
| TraesCS2A01G493800.1 | Wheat | cytosol | 66.11 | 69.59 |
| KRH76943 | Soybean | cytosol, extracellular, plasma membrane | 10.56 | 66.67 |
| TraesCS2A01G163800.1 | Wheat | cytosol | 65.28 | 66.57 |
| KRH28215 | Soybean | cytosol, plastid, vacuole | 22.22 | 66.12 |
| TraesCS1A01G215900.1 | Wheat | cytosol | 61.67 | 64.91 |
| TraesCS2A01G303900.1 | Wheat | cytosol | 63.61 | 64.15 |
| TraesCS1A01G270800.1 | Wheat | cytosol | 63.33 | 63.33 |
| TraesCS3A01G381100.1 | Wheat | cytosol | 62.22 | 61.71 |
| TraesCS7A01G539000.2 | Wheat | cytosol | 48.61 | 59.32 |
| TraesCS2A01G566700.1 | Wheat | cytosol | 62.22 | 57.29 |
| CDY52825 | Canola | plasma membrane | 23.89 | 51.5 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.5.2 | Gene3D:3.30.200.20 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24343 | PANTHER:PTHR24343:SF203 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS5A01G069500 | EnsemblPlants:TraesCS5A01G069500.1 | TIGR:cd14662 | SEG:seg | : |
Description
No Description!
Coordinates
chr5A:+:78157672..78159775
Molecular Weight (calculated)
40329.5 Da
IEP (calculated)
4.717
GRAVY (calculated)
-0.191
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MERGPAGTLS DVPVMLDGDR YELVRSIGSG NFGVARLMRN RASGELVAVK YIDRGEKIDE NVQREIINHR SLRHPNIIRF KEVILTPTHL AIVMEYASGG
101: ELFDRICTAG RFSVDEARFF FQQLISGVSY CHSMQVCHRD LKLENTLLDG STTPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKIADV
201: WSCGVTLYVM LVGAYPFEDP ENPKNFKMTI QKILGVPYSI PDYIHIPMDC RNLLSRIFVA NPATRITIPE IKNHPWFLKN LPADLMDGPT VSNQYEEPDQ
301: PMQNMNEIMQ IMAEATIPAA GALGINKFLP DGLDLDDDMD DLDSDLDIDM DSSGEIVYAM
101: ELFDRICTAG RFSVDEARFF FQQLISGVSY CHSMQVCHRD LKLENTLLDG STTPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKIADV
201: WSCGVTLYVM LVGAYPFEDP ENPKNFKMTI QKILGVPYSI PDYIHIPMDC RNLLSRIFVA NPATRITIPE IKNHPWFLKN LPADLMDGPT VSNQYEEPDQ
301: PMQNMNEIMQ IMAEATIPAA GALGINKFLP DGLDLDDDMD DLDSDLDIDM DSSGEIVYAM
001: MDPATNSPIM PIDLPIMHDS DRYDFVKDIG SGNFGVARLM TDRVTKELVA VKYIERGEKI DENVQREIIN HRSLRHPNIV RFKEVILTPS HLAIVMEYAA
101: GGELYERICN AGRFSEDEAR FFFQQLISGV SYCHAMQICH RDLKLENTLL DGSPAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEIL LRQEYDGKLA
201: DVWSCGVTLY VMLVGAYPFE DPQEPRDYRK TIQRILSVTY SIPEDLHLSP ECRHLISRIF VADPATRITI PEITSDKWFL KNLPGDLMDE NRMGSQFQEP
301: EQPMQSLDTI MQIISEATIP TVRNRCLDDF MADNLDLDDD MDDFDSESEI DVDSSGEIVY AL
101: GGELYERICN AGRFSEDEAR FFFQQLISGV SYCHAMQICH RDLKLENTLL DGSPAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEIL LRQEYDGKLA
201: DVWSCGVTLY VMLVGAYPFE DPQEPRDYRK TIQRILSVTY SIPEDLHLSP ECRHLISRIF VADPATRITI PEITSDKWFL KNLPGDLMDE NRMGSQFQEP
301: EQPMQSLDTI MQIISEATIP TVRNRCLDDF MADNLDLDDD MDDFDSESEI DVDSSGEIVY AL
Arabidopsis Description
SPK-2-2SNF1-related protein kinase 2.2 [Source:UniProtKB/TrEMBL;Acc:F4J0N1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.