CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92088

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	OQU92088	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0586100-01	Rice	cytosol	87.36	88.09
EER91234	Sorghum	cytosol	85.16	85.64
HORVU0Hr1G011570.1	Barley	cytosol	81.59	83.19
TraesCS5A01G069500.1	Wheat	cytosol	82.14	83.06
GSMUA_Achr4P28190_001	Banana	cytosol	82.14	82.37
TraesCS5D01G081700.1	Wheat	cytosol	82.14	82.14
TraesCS5B01G075800.1	Wheat	cytosol	81.87	82.09
GSMUA_Achr2P13360_001	Banana	cytosol	81.32	81.1
HORVU5Hr1G018340.2	Barley	cytosol	81.59	80.05
GSMUA_Achr4P23200_001	Banana	cytosol	80.22	79.56
EER93398	Sorghum	cytosol	79.67	79.23
Solyc02g090390.2.1	Tomato	cytosol	75.27	77.84
KRH76942	Soybean	cytosol	62.91	75.83
VIT_07s0197g00080.t01	Wine grape	cytosol	74.73	75.35
KRH04679	Soybean	nucleus, plastid	74.18	75.0
CDY01456	Canola	cytosol	74.45	74.86
CDY12785	Canola	cytosol	74.45	74.86
KRH57751	Soybean	nucleus	73.9	74.72
KRH28516	Soybean	cytosol	73.63	74.65
AT5G66880.1	Thale cress	cytosol	73.9	74.52
Bra012113.1-P	Field mustard	cytosol	73.08	74.51
Bra012897.1-P	Field mustard	cytosol	72.53	73.13
CDY23007	Canola	cytosol	72.53	73.13
CDY02082	Canola	cytosol	72.53	73.13
KRH76943	Soybean	cytosol, extracellular, plasma membrane	11.26	71.93
EER92182	Sorghum	cytosol	67.31	71.22
EER97562	Sorghum	cytosol	65.93	70.8
AT3G50500.2	Thale cress	cytosol	71.7	70.73
KRH28215	Soybean	cytosol, plastid, vacuole	22.53	67.77
KXG38898	Sorghum	cytosol	61.54	67.27
KXG33770	Sorghum	cytosol	64.56	65.1
EES06943	Sorghum	cytosol	63.46	63.46
EES19589	Sorghum	cytosol	62.36	63.23
KXG26327	Sorghum	cytosol	63.74	61.54
EES11705	Sorghum	cytosol	63.46	60.95
CDY52825	Canola	plasma membrane	23.35	50.9

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	EntrezGene:8069711	UniProt:C5YQV1	EnsemblPlants:EES17292
ProteinID:EES17292	ProteinID:EES17292.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF203	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	EnsemblPlantsGene:SORBI_3008G147000	SUPFAM:SSF56112	unigene:Sbi.6214	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A880CC
RefSeq:XP_002443454.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:58033219..58035909

Molecular Weight (calculated)

40543.4 Da

IEP (calculated)

4.550

GRAVY (calculated)

-0.236

Length

364 amino acids

Sequence
(BLAST)

001: MARTPAAAAA GSAVGMEMPI MHDGDRYEPV RDIGSGNFGV ARLMRNRATG DLVAVKYIDR GDKIDENVQR EIINHRSLRH PNIIRFKEVI LTKTHLAIVM
101: EYASGGELFN RICNAGRFSE DEARFFFQQL ISGVSYCHSM QVCHRDLKLE NTLLDGSTAP RLKICDFGYS KSSVLHSQPK STVGTPAYIA PEILLNKEYD
201: GKIADVWSCG VTLYVMLVGG YPFEDPEDPK NFKKTIQKIL GVQYAIPDYV CVSPECRDLI SRIFVANPAD RITMPEIKSH PWFVKNLPAD LVGDGTVSYE
301: EPDQPMQNMN EIMQILAEAT VPADGARGTT QLLCDDLDDF DDDMDLDSDL DLDIESSGEI VYAM

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.