CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH02667
KRH12454
KRH19237
KRH37441
KRH45453
KRH75621

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	KRH45453	AT4G17870.1	19874541
AT5G66880.1	KRH75621	AT4G17870.1	19874541
AT5G66880.1	KRH02667	AT4G26080.1	19874541
AT5G66880.1	KRH12454	AT4G26080.1	19874541
AT5G66880.1	KRH19237	AT4G26080.1	19874541
AT5G66880.1	KRH37441	AT4G26080.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33219	Soybean	cytosol	35.43	84.25
KRH28516	Soybean	cytosol	99.34	83.57
KRH28215	Soybean	cytosol, plastid, vacuole	32.45	80.99
KRH04679	Soybean	nucleus, plastid	86.42	72.5
KRH57751	Soybean	nucleus	85.43	71.67
KRG89230	Soybean	cytosol	82.45	68.41
KRH71186	Soybean	endoplasmic reticulum	80.13	68.36
GSMUA_Achr4P28190_001	Banana	cytosol	82.12	68.32
Solyc02g090390.2.1	Tomato	cytosol	79.47	68.18
VIT_07s0197g00080.t01	Wine grape	cytosol	81.13	67.87
KRH49772	Soybean	cytosol	82.45	67.3
Zm00001d013736_P001	Maize	cytosol	80.46	67.13
Bra012897.1-P	Field mustard	cytosol	79.8	66.76
AT5G66880.1	Thale cress	cytosol	79.8	66.76
GSMUA_Achr2P13360_001	Banana	cytosol	80.46	66.58
Os03t0610900-01	Rice	cytosol	79.8	66.57
EER91234	Sorghum	cytosol	79.8	66.57
KRH50231	Soybean	cytosol	80.79	66.48
TraesCS4D01G078100.2	Wheat	cytosol	79.47	66.48
TraesCS4A01G235600.2	Wheat	cytosol	79.47	66.48
TraesCS4B01G079300.1	Wheat	cytosol	79.47	66.48
HORVU4Hr1G013540.3	Barley	cytosol	79.47	66.48
AT3G50500.2	Thale cress	cytosol	80.79	66.12
Os12t0586100-01	Rice	cytosol	78.81	65.93
Bra012113.1-P	Field mustard	cytosol	77.81	65.83
EER93398	Sorghum	cytosol	79.47	65.57
GSMUA_Achr4P23200_001	Banana	cytosol	79.47	65.4
HORVU5Hr1G097630.1	Barley	cytosol	78.81	65.03
TraesCS5A01G401700.1	Wheat	cytosol	78.48	64.75
TraesCS5B01G406400.1	Wheat	cytosol	78.48	64.75
TraesCS5D01G411900.1	Wheat	cytosol	78.48	64.75
Zm00001d033339_P002	Maize	cytosol, extracellular	77.81	64.56
HORVU0Hr1G011570.1	Barley	cytosol	75.83	64.15
TraesCS5A01G069500.1	Wheat	cytosol	76.16	63.89
TraesCS5D01G081700.1	Wheat	cytosol	76.82	63.74
TraesCS5B01G075800.1	Wheat	cytosol	76.49	63.64
Os03t0764800-01	Rice	plasma membrane	77.81	63.34
EES17292	Sorghum	cytosol	75.83	62.91
Zm00001d013201_P003	Maize	cytosol	78.81	62.63
HORVU5Hr1G018340.2	Barley	cytosol	75.83	61.73
KRH57532	Soybean	cytosol, endoplasmic reticulum, nucleus	68.21	61.31
KRH04240	Soybean	cytosol	67.55	60.71
KRH72382	Soybean	cytosol	67.55	60.35
KRH43149	Soybean	cytosol	68.54	60.0
KRH16769	Soybean	cytosol	66.23	59.17
Zm00001d034161_P003	Maize	cytosol	77.15	58.4
KRH28204	Soybean	cytosol	65.23	58.11
KRH77286	Soybean	cytosol	64.9	57.82
KRH59295	Soybean	cytosol, endoplasmic reticulum	58.94	56.51
KRH41015	Soybean	endoplasmic reticulum	65.23	56.13
KRH44077	Soybean	endoplasmic reticulum, nucleus	65.23	55.97
KRH59681	Soybean	endoplasmic reticulum	64.9	55.84
KRH54011	Soybean	cytosol	63.91	55.78
KRH63934	Soybean	endoplasmic reticulum	63.91	55.3
KRH26363	Soybean	nucleus	65.56	55.15
Zm00001d024775_P002	Maize	cytosol	19.54	54.63
KRH43042	Soybean	cytosol	42.72	49.24
CDY52825	Canola	plasma membrane	26.16	47.31
KRH08581	Soybean	mitochondrion	15.89	42.11
Zm00001d020262_P003	Maize	cytosol	9.6	39.73
KRH30137	Soybean	extracellular, plasma membrane	15.23	38.33
Zm00001d011604_P003	Maize	mitochondrion	33.77	21.47
KRH76943	Soybean	cytosol, extracellular, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	UniProt:A0A0R0LD84	EMBL:ACUP02000646	EnsemblPlantsGene:GLYMA_01G1835002	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KRH76942	ProteinID:KRH76942	ProteinID:KRH76942.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF162
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0006EDBB4C	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:51865338..51873203

Molecular Weight (calculated)

34392.0 Da

IEP (calculated)

4.347

GRAVY (calculated)

-0.160

Length

302 amino acids

Sequence
(BLAST)

001: IDENVKREII NHRSLRHPNI IRFKEVILTP THLAIVMEYA SGGELFEKIC NAGRFNEDEA RFFFQQLISG VSYCHAMEVC HRDLKLENTL LDGSPALHLK
101: ICDFGYSKSS VLHSQPKSTV GTPAYIAPEV LLKQEYDGKI ADVWSCGVTL FVMLVGSYPF EDPNDPKDFR KTIQRVLSVQ YSIPDNVQVS PECRHLISRI
201: FVFDPAERIT IPEILQNEWF LKNLPPYLMD EKIMGNQFVE SDQPMQNIDT IMQIISEATI PAAGTYSLDQ FMADNIIDDD MDELDSDFEL DVDSSGEIVY
301: AI

Best Arabidopsis Sequence Match ( AT3G50500.1 )
(BLAST)

001: MDPATNSPIM PIDLPIMHDS DRYDFVKDIG SGNFGVARLM TDRVTKELVA VKYIERGEKI DENVQREIIN HRSLRHPNIV RFKEVILTPS HLAIVMEYAA
101: GGELYERICN AGRFSEDEAR FFFQQLISGV SYCHAMQICH RDLKLENTLL DGSPAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEIL LRQEYDGKLA
201: DVWSCGVTLY VMLVGAYPFE DPQEPRDYRK TIQRILSVTY SIPEDLHLSP ECRHLISRIF VADPATRITI PEITSDKWFL KNLPGDLMDE NRMGSQFQEP
301: EQPMQSLDTI MQIISEATIP TVRNRCLDDF MADNLDLDDD MDDFDSESEI DVDSSGEIVY AL

Arabidopsis Description

SPK-2-2SNF1-related protein kinase 2.2 [Source:UniProtKB/TrEMBL;Acc:F4J0N1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.