Factsheet for TraesCS5D01G411900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G191700.1
TraesCS1B01G206600.1
TraesCS1D01G195300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	TraesCS1A01G191700.1	AT4G17870.1	19874541
AT5G66880.1	TraesCS1B01G206600.1	AT4G17870.1	19874541
AT5G66880.1	TraesCS1D01G195300.1	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G406400.1	Wheat	cytosol	100.0	100.0
TraesCS5A01G401700.1	Wheat	cytosol	100.0	100.0
HORVU5Hr1G097630.1	Barley	cytosol	99.45	99.45
Os03t0764800-01	Rice	plasma membrane	95.36	94.07
EER93398	Sorghum	cytosol	93.99	93.99
Zm00001d013201_P003	Maize	cytosol	93.17	89.74
TraesCS4D01G078100.2	Wheat	cytosol	86.61	87.81
GSMUA_Achr4P28190_001	Banana	cytosol	85.52	86.23
Zm00001d034161_P003	Maize	cytosol	92.08	84.46
KRH76943	Soybean	cytosol, extracellular, plasma membrane	13.11	84.21
GSMUA_Achr2P13360_001	Banana	cytosol	83.33	83.56
GSMUA_Achr4P23200_001	Banana	cytosol	83.33	83.11
Solyc02g090390.2.1	Tomato	cytosol	79.78	82.95
VIT_07s0197g00080.t01	Wine grape	cytosol	79.51	80.61
KRH04679	Soybean	nucleus, plastid	79.23	80.56
KRH57751	Soybean	nucleus	79.23	80.56
AT5G66880.1	Thale cress	cytosol	78.96	80.06
TraesCS5D01G081700.1	Wheat	cytosol	79.51	79.95
KRH28516	Soybean	cytosol	77.6	79.11
CDY01456	Canola	cytosol	78.14	79.01
CDY12785	Canola	cytosol	78.14	79.01
Bra012113.1-P	Field mustard	cytosol	76.78	78.71
KRH76942	Soybean	cytosol	64.75	78.48
KRH28215	Soybean	cytosol, plastid, vacuole	25.68	77.69
CDY23007	Canola	cytosol	75.96	77.01
Bra012897.1-P	Field mustard	cytosol	75.68	76.73
CDY02082	Canola	cytosol	75.68	76.73
AT3G50500.2	Thale cress	cytosol	76.5	75.88
TraesCS2D01G170700.1	Wheat	cytosol	66.12	70.97
TraesCS2D01G493700.1	Wheat	cytosol	65.85	70.47
TraesCS1D01G218200.1	Wheat	cytosol	61.75	66.08
TraesCS2D01G302500.1	Wheat	cytosol, golgi	62.57	64.15
TraesCS3D01G374300.1	Wheat	cytosol	63.39	63.91
TraesCS1D01G271000.1	Wheat	cytosol	63.39	62.2
TraesCS7D01G525100.1	Wheat	cytosol	50.82	59.81
TraesCS2D01G577000.1	Wheat	cytosol	62.57	58.57
CDY52825	Canola	plasma membrane	23.5	51.5

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF162
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5D01G411900
EnsemblPlants:TraesCS5D01G411900.1	TIGR:cd14662	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:475302613..475308694

Molecular Weight (calculated)

41592.8 Da

IEP (calculated)

4.643

GRAVY (calculated)

-0.315

Length

366 amino acids

Sequence
(BLAST)

001: MAGAAPDRAA LTVGPGMDMP IMHDSDRYEL VRDIGSGNFG VARLMRDRRT MELVAVKYIE RGEKIDENVQ REIINHRSLK HPNIIRFKEV ILTPTHLAIV
101: MEYASGGELF ERICKNIRFS EDEARYFFQQ LISGVSYCHS MQVCHRDLKL ENTLLDGSPA PRLKICDFGY SKSSVLHSQP KSTVGTPAYI APEVLLKKEY
201: DGKIADVWSC GVTLYVMVVG AYPFEDPEEP KNFRKTIQRI LSVQYSIPDN VDISPECRHL ISRIFVGDPA LRITIPEIRS HNWFLKNLPA DLMDDDSMSS
301: QYEEPEQRMQ TMDEIMQILT EATIPPACSR INHILTDGFD MDDDMDDLES DSDLDIDSSG EIVYAM

Best Arabidopsis Sequence Match ( AT3G50500.1 )
(BLAST)

001: MDPATNSPIM PIDLPIMHDS DRYDFVKDIG SGNFGVARLM TDRVTKELVA VKYIERGEKI DENVQREIIN HRSLRHPNIV RFKEVILTPS HLAIVMEYAA
101: GGELYERICN AGRFSEDEAR FFFQQLISGV SYCHAMQICH RDLKLENTLL DGSPAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEIL LRQEYDGKLA
201: DVWSCGVTLY VMLVGAYPFE DPQEPRDYRK TIQRILSVTY SIPEDLHLSP ECRHLISRIF VADPATRITI PEITSDKWFL KNLPGDLMDE NRMGSQFQEP
301: EQPMQSLDTI MQIISEATIP TVRNRCLDDF MADNLDLDDD MDDFDSESEI DVDSSGEIVY AL

Arabidopsis Description

SPK-2-2SNF1-related protein kinase 2.2 [Source:UniProtKB/TrEMBL;Acc:F4J0N1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.