Factsheet for Bra012113.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010441.1-P
Bra012635.1-P
Bra013262.1-P
Bra013945.1-P
Bra019121.1-P
Bra021032.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	Bra012635.1-P	AT4G17870.1	19874541
AT5G66880.1	Bra013262.1-P	AT4G17870.1	19874541
AT5G66880.1	Bra021032.1-P	AT4G17870.1	19874541
AT5G66880.1	Bra010441.1-P	AT4G26080.1	19874541
AT5G66880.1	Bra013945.1-P	AT4G26080.1	19874541
AT5G66880.1	Bra019121.1-P	AT4G26080.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01456	Canola	cytosol	100.0	98.62
CDY12785	Canola	cytosol	99.44	98.07
AT5G66880.1	Thale cress	cytosol	95.52	94.46
KRH76943	Soybean	cytosol, extracellular, plasma membrane	14.01	87.72
Bra012897.1-P	Field mustard	cytosol	88.52	87.53
VIT_07s0197g00080.t01	Wine grape	cytosol	82.91	81.99
Solyc02g090390.2.1	Tomato	cytosol	80.67	81.82
KRH04679	Soybean	nucleus, plastid	82.07	81.39
KRH57751	Soybean	nucleus	81.23	80.56
GSMUA_Achr4P28190_001	Banana	cytosol	81.23	79.89
KRH28516	Soybean	cytosol	79.83	79.39
Zm00001d013736_P001	Maize	cytosol	80.39	79.28
Os03t0610900-01	Rice	cytosol	80.39	79.28
EER91234	Sorghum	cytosol	80.39	79.28
TraesCS4A01G235600.2	Wheat	cytosol	79.83	78.95
HORVU4Hr1G013540.3	Barley	cytosol	79.83	78.95
TraesCS4D01G078100.2	Wheat	cytosol	79.83	78.95
TraesCS4B01G079300.1	Wheat	cytosol	79.83	78.95
Bra017615.1-P	Field mustard	cytosol	78.99	77.9
KRH76942	Soybean	cytosol	65.83	77.81
Bra011481.1-P	Field mustard	cytosol	78.71	77.62
Zm00001d033339_P002	Maize	cytosol, extracellular	78.71	77.2
HORVU5Hr1G097630.1	Barley	cytosol	78.99	77.05
TraesCS5B01G406400.1	Wheat	cytosol	78.71	76.78
TraesCS5D01G411900.1	Wheat	cytosol	78.71	76.78
TraesCS5A01G401700.1	Wheat	cytosol	78.71	76.78
GSMUA_Achr2P13360_001	Banana	cytosol	78.43	76.71
EER93398	Sorghum	cytosol	78.43	76.5
GSMUA_Achr4P23200_001	Banana	cytosol	78.43	76.29
Os03t0764800-01	Rice	plasma membrane	78.99	76.01
Os12t0586100-01	Rice	cytosol	75.35	74.52
Zm00001d013201_P003	Maize	cytosol	78.15	73.42
EES17292	Sorghum	cytosol	74.51	73.08
HORVU0Hr1G011570.1	Barley	cytosol	72.83	72.83
TraesCS5A01G069500.1	Wheat	cytosol	73.39	72.78
TraesCS5B01G075800.1	Wheat	cytosol	73.95	72.73
TraesCS5D01G081700.1	Wheat	cytosol	73.95	72.53
KRH28215	Soybean	cytosol, plastid, vacuole	24.37	71.9
HORVU5Hr1G018340.2	Barley	cytosol	72.83	70.08
Zm00001d034161_P003	Maize	cytosol	76.75	68.67
Bra011815.1-P	Field mustard	cytosol	64.15	65.99
Bra031475.1-P	Field mustard	cytosol	64.71	65.62
Bra018417.1-P	Field mustard	cytosol	63.31	63.84
Bra038652.1-P	Field mustard	cytosol	63.31	63.31
Bra031740.1-P	Field mustard	cytosol	63.03	63.03
Bra032188.1-P	Field mustard	cytosol	59.66	62.46
Bra019889.1-P	Field mustard	cytosol	62.75	62.4
Bra019890.1-P	Field mustard	cytosol	17.65	61.16
Bra009354.1-P	Field mustard	cytosol	63.03	60.81
Bra006010.1-P	Field mustard	cytosol	62.18	59.68
Zm00001d024775_P002	Maize	cytosol	17.09	56.48
Bra017866.1-P	Field mustard	cytosol, nucleus, plastid	17.93	55.65
Bra035026.1-P	Field mustard	cytosol	26.05	55.03
Bra003650.1-P	Field mustard	cytosol	63.03	47.07
Zm00001d020262_P003	Maize	cytosol	9.52	46.58
Zm00001d011604_P003	Maize	mitochondrion	31.93	24.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra012113	EnsemblPlants:Bra012113.1	EnsemblPlants:Bra012113.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006970	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719
GO:GO:0009737	GO:GO:0009739	GO:GO:0009791	GO:GO:0009987	GO:GO:0010029	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4D6K4
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343
PANTHER:PTHR24343:SF162	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000254176D	SEG:seg	:	:	:	:

Description

AT5G66880 (E=1e-178) SNRK2-3, SNRK2.3, SRK2I | SNRK2.3 (SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3); kinase/ protein kinase

Coordinates

chrA07:-:9932980..9936486

Molecular Weight (calculated)

40483.2 Da

IEP (calculated)

4.587

GRAVY (calculated)

-0.307

Length

357 amino acids

Sequence
(BLAST)

001: MDRAAAVGTG PMDMPIMHDS DRYDFVKDIG SGNFGVARLM RDKVTKELVA VKYIERGDKI DENVQREIIN HRSLRHPNIV RFREVILTPT HLAIIMEYAS
101: GGELYERICN AGRFSEDEAR FFFQQLISGV SYCHAMQICH RDLKLENTLL DGSPAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEVL LRQEYDGKSC
201: GVTLYVMLVG AYPFEDPDEP RDYRKTIQRI LSVKYAIPED VRISPECCHL ISRIFVADPA TRISIPEIKN HAWFLKNLPA DLIEESNTGS QFQEPEQPMQ
301: SLDTIMQIIS EATIPAVRNR CLDDFMTDNL DLDDDMDDFD SESEIDIDSS GEIVYAL

Best Arabidopsis Sequence Match ( AT5G66880.1 )
(BLAST)

001: MDRAPVTTGP LDMPIMHDSD RYDFVKDIGS GNFGVARLMR DKLTKELVAV KYIERGDKID ENVQREIINH RSLRHPNIVR FKEVILTPTH LAIIMEYASG
101: GELYERICNA GRFSEDEARF FFQQLLSGVS YCHSMQICHR DLKLENTLLD GSPAPRLKIC DFGYSKSSVL HSQPKSTVGT PAYIAPEVLL RQEYDGKIAD
201: VWSCGVTLYV MLVGAYPFED PEEPRDYRKT IQRILSVKYS IPDDIRISPE CCHLISRIFV ADPATRISIP EIKTHSWFLK NLPADLMNES NTGSQFQEPE
301: QPMQSLDTIM QIISEATIPA VRNRCLDDFM TDNLDLDDDM DDFDSESEID IDSSGEIVYA L

Arabidopsis Description

SRK2ISerine/threonine-protein kinase SRK2I [Source:UniProtKB/Swiss-Prot;Acc:Q39193]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.