Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d030045_P001 | |
| Zm00001d047037_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66880.1 | Zm00001d030045_P001 | AT4G17870.1 | 19874541 |
| AT5G66880.1 | Zm00001d047037_P001 | AT4G17870.1 | 19874541 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024775_P002 | Maize | cytosol | 47.95 | 32.41 |
| Zm00001d013736_P001 | Maize | cytosol | 64.38 | 12.98 |
| Zm00001d033339_P002 | Maize | cytosol, extracellular | 63.01 | 12.64 |
| Zm00001d011604_P003 | Maize | mitochondrion | 82.19 | 12.63 |
| GSMUA_Achr4P28190_001 | Banana | cytosol | 57.53 | 11.57 |
| GSMUA_Achr2P13360_001 | Banana | cytosol | 57.53 | 11.51 |
| Bra012897.1-P | Field mustard | cytosol | 52.05 | 10.53 |
| CDY02082 | Canola | cytosol | 52.05 | 10.53 |
| GSMUA_Achr4P23200_001 | Banana | cytosol | 52.05 | 10.35 |
| Zm00001d013201_P003 | Maize | cytosol | 53.42 | 10.26 |
| CDY23007 | Canola | cytosol | 50.68 | 10.25 |
| VIT_07s0197g00080.t01 | Wine grape | cytosol | 49.32 | 9.97 |
| Zm00001d034161_P003 | Maize | cytosol | 53.42 | 9.77 |
| KRH04679 | Soybean | nucleus, plastid | 47.95 | 9.72 |
| KRH57751 | Soybean | nucleus | 47.95 | 9.72 |
| KRH76942 | Soybean | cytosol | 39.73 | 9.6 |
| Bra012113.1-P | Field mustard | cytosol | 46.58 | 9.52 |
| AT3G50500.2 | Thale cress | cytosol | 47.95 | 9.49 |
| AT5G66880.1 | Thale cress | cytosol | 46.58 | 9.42 |
| CDY01456 | Canola | cytosol | 46.58 | 9.39 |
| CDY12785 | Canola | cytosol | 46.58 | 9.39 |
| Solyc02g090390.2.1 | Tomato | cytosol | 43.84 | 9.09 |
| KRH28516 | Soybean | cytosol | 42.47 | 8.64 |
| Zm00001d042188_P001 | Maize | plastid | 20.55 | 7.5 |
| Zm00001d029975_P003 | Maize | cytosol, extracellular | 28.77 | 6.31 |
| Zm00001d022179_P001 | Maize | cytosol | 28.77 | 6.09 |
| Zm00001d050723_P001 | Maize | cytosol | 30.14 | 6.04 |
| Zm00001d016783_P001 | Maize | cytosol | 30.14 | 6.04 |
| Zm00001d047220_P003 | Maize | cytosol | 28.77 | 5.93 |
| Zm00001d003659_P002 | Maize | extracellular, plasma membrane | 28.77 | 5.9 |
| Zm00001d038326_P003 | Maize | cytosol | 27.4 | 5.57 |
| Zm00001d012263_P002 | Maize | cytosol | 27.4 | 5.32 |
| Zm00001d042695_P002 | Maize | cytosol | 27.4 | 5.1 |
| Zm00001d026690_P001 | Maize | cytosol | 23.29 | 4.68 |
| Zm00001d047445_P001 | Maize | plastid | 10.96 | 3.77 |
| Zm00001d003758_P001 | Maize | extracellular, mitochondrion, plasma membrane | 4.11 | 2.88 |
| CDY52825 | Canola | plasma membrane | 4.11 | 1.8 |
| KRH76943 | Soybean | cytosol, extracellular, plasma membrane | 1.37 | 1.75 |
| KRH28215 | Soybean | cytosol, plastid, vacuole | 2.74 | 1.65 |
Protein Annotations
| EnsemblPlants:Zm00001d020262_P003 | EnsemblPlants:Zm00001d020262_T003 | EnsemblPlantsGene:Zm00001d020262 | PANTHER:PTHR24343 | PANTHER:PTHR24343:SF203 | ProteinID:ONM54626.1 |
| ProteinID:ONM54627.1 | ProteinID:ONM54628.1 | UniParc:UPI00084280B7 | UniProt:A0A1D6I396 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7:-:102848405..102850772
Molecular Weight (calculated)
8360.0 Da
IEP (calculated)
4.297
GRAVY (calculated)
-0.474
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MRSDAIRDAG ITDVTYTDDH HPWFLKNLLA DLMDDNTMSK QYEEPEQLMQ SMNKFMQILV EATIPAVGSR GLN
001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GETTQNINFS ISCLF
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GETTQNINFS ISCLF
Arabidopsis Description
SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.