CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
mitochondrion 1
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane
Any Predictor:	cytosol, extracellular, mitochondrion, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH02667
KRH12454
KRH19237
KRH37441
KRH45453
KRH75621

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	KRH45453	AT4G17870.1	19874541
AT5G66880.1	KRH75621	AT4G17870.1	19874541
AT5G66880.1	KRH02667	AT4G26080.1	19874541
AT5G66880.1	KRH12454	AT4G26080.1	19874541
AT5G66880.1	KRH19237	AT4G26080.1	19874541
AT5G66880.1	KRH37441	AT4G26080.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28516	Soybean	cytosol	100.0	15.88
KRH04679	Soybean	nucleus, plastid	91.23	14.44
KRH57751	Soybean	nucleus	91.23	14.44
Solyc02g090390.2.1	Tomato	cytosol	87.72	14.2
KRG89230	Soybean	cytosol	89.47	14.01
Bra012113.1-P	Field mustard	cytosol	87.72	14.01
AT5G66880.1	Thale cress	cytosol	87.72	13.85
KRH49772	Soybean	cytosol	87.72	13.51
GSMUA_Achr4P28190_001	Banana	cytosol	85.96	13.5
VIT_07s0197g00080.t01	Wine grape	cytosol	84.21	13.3
TraesCS5A01G401700.1	Wheat	cytosol	84.21	13.11
EER93398	Sorghum	cytosol	84.21	13.11
TraesCS5B01G406400.1	Wheat	cytosol	84.21	13.11
HORVU5Hr1G097630.1	Barley	cytosol	84.21	13.11
TraesCS5D01G411900.1	Wheat	cytosol	84.21	13.11
GSMUA_Achr4P23200_001	Banana	cytosol	84.21	13.08
Os03t0764800-01	Rice	plasma membrane	84.21	12.94
GSMUA_Achr2P13360_001	Banana	cytosol	82.46	12.88
KRH50231	Soybean	cytosol	82.46	12.81
KRH71186	Soybean	endoplasmic reticulum	78.95	12.71
Os03t0610900-01	Rice	cytosol	80.7	12.71
Zm00001d013201_P003	Maize	cytosol	84.21	12.63
Zm00001d013736_P001	Maize	cytosol	78.95	12.43
EER91234	Sorghum	cytosol	78.95	12.43
HORVU4Hr1G013540.3	Barley	cytosol	77.19	12.19
TraesCS4A01G235600.2	Wheat	cytosol	77.19	12.19
TraesCS4B01G079300.1	Wheat	cytosol	77.19	12.19
TraesCS4D01G078100.2	Wheat	cytosol	77.19	12.19
Zm00001d033339_P002	Maize	cytosol, extracellular	77.19	12.09
Zm00001d034161_P003	Maize	cytosol	84.21	12.03
Bra012897.1-P	Field mustard	cytosol	75.44	11.91
AT3G50500.2	Thale cress	cytosol	75.44	11.65
EES17292	Sorghum	cytosol	71.93	11.26
TraesCS5B01G075800.1	Wheat	cytosol	70.18	11.02
TraesCS5D01G081700.1	Wheat	cytosol	68.42	10.71
TraesCS5A01G069500.1	Wheat	cytosol	66.67	10.56
Os12t0586100-01	Rice	cytosol	66.67	10.53
HORVU0Hr1G011570.1	Barley	cytosol	63.16	10.08
HORVU5Hr1G018340.2	Barley	cytosol	63.16	9.7
KRH26363	Soybean	nucleus	54.39	8.64
KRH44077	Soybean	endoplasmic reticulum, nucleus	52.63	8.52
KRH54011	Soybean	cytosol	50.88	8.38
KRH63934	Soybean	endoplasmic reticulum	50.88	8.31
KRH59681	Soybean	endoplasmic reticulum	50.88	8.26
KRH41015	Soybean	endoplasmic reticulum	50.88	8.26
KRH57532	Soybean	cytosol, endoplasmic reticulum, nucleus	47.37	8.04
KRH04240	Soybean	cytosol	47.37	8.04
KRH43042	Soybean	cytosol	36.84	8.02
KRH72382	Soybean	cytosol	45.61	7.69
KRH77286	Soybean	cytosol	45.61	7.67
KRH28204	Soybean	cytosol	45.61	7.67
KRH59295	Soybean	cytosol, endoplasmic reticulum	42.11	7.62
KRH16769	Soybean	cytosol	43.86	7.4
KRH43149	Soybean	cytosol	42.11	6.96
CDY52825	Canola	plasma membrane	8.77	2.99
Zm00001d011604_P003	Maize	mitochondrion	24.56	2.95
Zm00001d024775_P002	Maize	cytosol	5.26	2.78
KRH08581	Soybean	mitochondrion	5.26	2.63
Zm00001d020262_P003	Maize	cytosol	1.75	1.37
KRH33219	Soybean	cytosol	0.0	0.0
KRH30137	Soybean	extracellular, plasma membrane	0.0	0.0
KRH28215	Soybean	cytosol, plastid, vacuole	0.0	0.0
KRH76942	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.200.20	MapMan:35.1	UniProt:A0A0R0LLU4	EMBL:ACUP02000647	EnsemblPlantsGene:GLYMA_01G1835001	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KRH76943	ProteinID:KRH76943	ProteinID:KRH76943.1	ProteinID:KRH76944.1
InterPro:Kinase-like_dom_sf	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF162	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	UniParc:UPI0006EDF17B	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:51876358..51876976

Molecular Weight (calculated)

6456.7 Da

IEP (calculated)

5.765

GRAVY (calculated)

-0.693

Length

57 amino acids

Sequence
(BLAST)

1: MDRPATGPGV DMPIMHDSDR YDFVRDIGSG NFGVARLMRD KQTQELVAVK YIERGDK

Best Arabidopsis Sequence Match ( AT4G33950.2 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GETTQNINFS ISCLF

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.