CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92088

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	OQU92088	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013736_P001	Maize	cytosol	97.79	97.79
Zm00001d033339_P002	Maize	cytosol, extracellular	97.24	96.7
Os03t0610900-01	Rice	cytosol	96.69	96.69
TraesCS4D01G078100.2	Wheat	cytosol	95.86	96.12
TraesCS4B01G079300.1	Wheat	cytosol	95.86	96.12
TraesCS4A01G235600.2	Wheat	cytosol	95.86	96.12
HORVU4Hr1G013540.3	Barley	cytosol	95.86	96.12
GSMUA_Achr4P28190_001	Banana	cytosol	90.61	90.36
GSMUA_Achr2P13360_001	Banana	cytosol	88.4	87.67
EER93398	Sorghum	cytosol	87.29	86.34
GSMUA_Achr4P23200_001	Banana	cytosol	87.29	86.1
EES17292	Sorghum	cytosol	85.64	85.16
Solyc02g090390.2.1	Tomato	cytosol	79.56	81.82
KRH57751	Soybean	nucleus	80.94	81.39
KRH04679	Soybean	nucleus, plastid	80.66	81.11
VIT_07s0197g00080.t01	Wine grape	cytosol	80.66	80.89
AT5G66880.1	Thale cress	cytosol	80.39	80.61
Bra012113.1-P	Field mustard	cytosol	79.28	80.39
CDY01456	Canola	cytosol	80.39	80.39
CDY12785	Canola	cytosol	80.39	80.39
KRH76942	Soybean	cytosol	66.57	79.8
KRH28516	Soybean	cytosol	79.01	79.67
KRH76943	Soybean	cytosol, extracellular, plasma membrane	12.43	78.95
CDY23007	Canola	cytosol	77.62	77.84
CDY02082	Canola	cytosol	77.62	77.84
Bra012897.1-P	Field mustard	cytosol	77.62	77.84
AT3G50500.2	Thale cress	cytosol	78.18	76.69
KRH28215	Soybean	cytosol, plastid, vacuole	24.86	74.38
EER92182	Sorghum	cytosol	69.89	73.55
EER97562	Sorghum	cytosol	68.23	72.86
KXG38898	Sorghum	cytosol	62.98	68.47
KXG33770	Sorghum	cytosol	66.57	66.76
EES06943	Sorghum	cytosol	66.85	66.48
EES19589	Sorghum	cytosol	64.09	64.62
KXG26327	Sorghum	cytosol	67.13	64.46
EES11705	Sorghum	cytosol	64.64	61.74
CDY52825	Canola	plasma membrane	24.86	53.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	MapMan:26.2.1.3	Gene3D:3.30.200.20	EntrezGene:8062515	UniProt:C5WT44
EnsemblPlants:EER91234	ProteinID:EER91234	ProteinID:EER91234.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343
PANTHER:PTHR24343:SF162	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G168400	SUPFAM:SSF56112
unigene:Sbi.4275	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A821AF	RefSeq:XP_002464236.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:14017804..14021004

Molecular Weight (calculated)

40831.8 Da

IEP (calculated)

4.571

GRAVY (calculated)

-0.298

Length

362 amino acids

Sequence
(BLAST)

001: MDRAALTVGP GMDMPIMHDG DRYELVRDIG SGNFGVARLM RNRADGQLVA VKYIERGEKI DENVQREIIN HRSLRHPNII RFKEVILTPT HLAIVMEYAS
101: GGELFERICN AGRFSEDEAR FFFQQLISGV SYCHSMQVCH RDLKLENTLL DGSTAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEVL LKKEYDGKVA
201: DVWSCGVTLY VMLVGAYPFE DPDEPKNFRK TIQRILGVQY SIPDYVHISP ECQDLISRIF VANPATRITI PEIRNHPWFL KNLPADLMDD STMSKQYEEP
301: EQPMQSMDEI MQILAEATIP AAGSRGLNQF LNDGLDLDDD MEDLDSDADL DLESSGEIVY AM

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.