Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G050110.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66880.1 | HORVU1Hr1G050110.1 | AT4G17870.1 | 19874541 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G011570.1 | Barley | cytosol | 96.23 | 100.0 |
| TraesCS5A01G069500.1 | Wheat | cytosol | 94.88 | 97.78 |
| TraesCS5B01G075800.1 | Wheat | cytosol | 94.34 | 96.42 |
| TraesCS5D01G081700.1 | Wheat | cytosol | 94.34 | 96.15 |
| Os12t0586100-01 | Rice | cytosol | 83.83 | 86.15 |
| HORVU4Hr1G013540.3 | Barley | cytosol | 81.94 | 84.21 |
| GSMUA_Achr4P28190_001 | Banana | cytosol | 81.13 | 82.92 |
| EES17292 | Sorghum | cytosol | 80.05 | 81.59 |
| GSMUA_Achr2P13360_001 | Banana | cytosol | 79.78 | 81.1 |
| GSMUA_Achr4P23200_001 | Banana | cytosol | 78.17 | 79.02 |
| HORVU5Hr1G097630.1 | Barley | cytosol | 77.63 | 78.69 |
| VIT_07s0197g00080.t01 | Wine grape | cytosol | 74.12 | 76.18 |
| Solyc02g090390.2.1 | Tomato | cytosol | 72.24 | 76.14 |
| KRH76942 | Soybean | cytosol | 61.73 | 75.83 |
| AT5G66880.1 | Thale cress | cytosol | 73.05 | 75.07 |
| KRH57751 | Soybean | nucleus | 71.7 | 73.89 |
| KRH04679 | Soybean | nucleus, plastid | 71.16 | 73.33 |
| KRH28516 | Soybean | cytosol | 70.89 | 73.26 |
| CDY01456 | Canola | cytosol | 71.43 | 73.2 |
| CDY12785 | Canola | cytosol | 71.43 | 73.2 |
| Bra012897.1-P | Field mustard | cytosol | 71.16 | 73.13 |
| CDY02082 | Canola | cytosol | 71.16 | 73.13 |
| CDY23007 | Canola | cytosol | 70.89 | 72.85 |
| Bra012113.1-P | Field mustard | cytosol | 70.08 | 72.83 |
| AT3G50500.2 | Thale cress | cytosol | 70.89 | 71.27 |
| HORVU5Hr1G120320.1 | Barley | cytosol | 15.9 | 67.82 |
| HORVU2Hr1G022050.5 | Barley | cytosol | 23.18 | 67.19 |
| KRH28215 | Soybean | cytosol, plastid, vacuole | 21.56 | 66.12 |
| HORVU1Hr1G055340.9 | Barley | cytosol | 60.38 | 65.69 |
| HORVU6Hr1G078410.2 | Barley | cytosol | 15.36 | 65.52 |
| HORVU2Hr1G110230.16 | Barley | cytosol | 60.65 | 65.41 |
| HORVU2Hr1G075470.2 | Barley | cytosol | 61.99 | 64.43 |
| HORVU4Hr1G087060.1 | Barley | cytosol | 29.92 | 64.16 |
| KRH76943 | Soybean | cytosol, extracellular, plasma membrane | 9.7 | 63.16 |
| HORVU2Hr1G125950.1 | Barley | cytosol | 60.38 | 59.89 |
| HORVU3Hr1G082690.7 | Barley | cytosol | 60.11 | 58.38 |
| HORVU7Hr1G118150.18 | Barley | cytosol | 47.17 | 56.27 |
| HORVU1Hr1G074670.8 | Barley | cytosol, plastid | 62.26 | 55.0 |
| CDY52825 | Canola | plasma membrane | 22.91 | 50.9 |
| HORVU2Hr1G029900.2 | Barley | cytosol | 63.34 | 50.87 |
| HORVU0Hr1G032690.1 | Barley | cytosol | 8.63 | 48.48 |
| HORVU1Hr1G069270.1 | Barley | cytosol | 8.63 | 48.48 |
| HORVU0Hr1G032840.1 | Barley | cytosol | 8.63 | 48.48 |
| HORVU7Hr1G117730.1 | Barley | cytosol | 8.36 | 46.97 |
| HORVU7Hr1G080330.1 | Barley | cytosol | 7.82 | 43.94 |
| HORVU5Hr1G120330.1 | Barley | cytosol | 6.74 | 37.88 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.5.2 | Gene3D:3.30.200.20 | UniProt:A0A287QJ02 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:HORVU5Hr1G018340 | EnsemblPlants:HORVU5Hr1G018340.2 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 |
| PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24343 | PANTHER:PTHR24343:SF203 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI000B46A741 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:74272143..74274322
Molecular Weight (calculated)
41333.8 Da
IEP (calculated)
4.782
GRAVY (calculated)
-0.147
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: VSVLGGGRVV GAGAMERGTM GDVPVMLDGD RYELVRSIGS GNFGVARLMR NRASGELVAV KYIDRGEKID ENVQREIINH RSLRHPNIIR FKEVILTPTH
101: LAIVMEYASG GELFDRICTA GRFSVDEARF FFQQLISGVS YCHSMQVCHR DLKLENTLLD GSTTPRLKIC DFGYSKSSVL HSQPKSTVGT PAYIAPEVLI
201: KKEYDGKIAD VWSCGVTLYV MLVGAYPFED PENPKNFKMT IQKILGVQYS IPDYIHIPMD CRNLLSRIFV ANPATRITIP EIKNHPWFLK NLPADLMDGP
301: TVSNQYEEPD QPMQNMNEIM QIMAEATIPA ASALGINKFL PDGLDLDDDM DDLDSDLDID MDSSGEIVYA M
101: LAIVMEYASG GELFDRICTA GRFSVDEARF FFQQLISGVS YCHSMQVCHR DLKLENTLLD GSTTPRLKIC DFGYSKSSVL HSQPKSTVGT PAYIAPEVLI
201: KKEYDGKIAD VWSCGVTLYV MLVGAYPFED PENPKNFKMT IQKILGVQYS IPDYIHIPMD CRNLLSRIFV ANPATRITIP EIKNHPWFLK NLPADLMDGP
301: TVSNQYEEPD QPMQNMNEIM QIMAEATIPA ASALGINKFL PDGLDLDDDM DDLDSDLDID MDSSGEIVYA M
001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM
Arabidopsis Description
SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.