Factsheet for Bra017866.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31613	Canola	cytosol	94.78	78.42
Solyc11g010130.1.1	Tomato	cytosol	57.39	28.82
Zm00001d003758_P001	Maize	extracellular, mitochondrion, plasma membrane	23.48	25.96
Bra011815.1-P	Field mustard	cytosol	66.96	22.19
Bra031475.1-P	Field mustard	cytosol	61.74	20.17
Bra038652.1-P	Field mustard	cytosol	62.61	20.17
Bra018417.1-P	Field mustard	cytosol	59.13	19.21
Bra011481.1-P	Field mustard	cytosol	60.0	19.06
Bra031740.1-P	Field mustard	cytosol	59.13	19.05
Bra009354.1-P	Field mustard	cytosol	60.0	18.65
Bra019889.1-P	Field mustard	cytosol	57.39	18.38
Bra006010.1-P	Field mustard	cytosol	59.13	18.28
Bra017615.1-P	Field mustard	cytosol	56.52	17.96
Bra012113.1-P	Field mustard	cytosol	55.65	17.93
Bra032188.1-P	Field mustard	cytosol	53.04	17.89
Bra035026.1-P	Field mustard	cytosol	25.22	17.16
Bra012897.1-P	Field mustard	cytosol	49.57	15.79
Bra003650.1-P	Field mustard	cytosol	53.91	12.97
Bra019890.1-P	Field mustard	cytosol	2.61	2.91

Protein Annotations

EnsemblPlants:Bra017866.1	EnsemblPlants:Bra017866.1-P	EnsemblPlantsGene:Bra017866	Gene3D:1.10.510.10	InterPro:Kinase-like_dom_sf	PANTHER:PTHR24343
PANTHER:PTHR24343:SF313	SEG:seg	SUPFAM:SSF56112	UniParc:UPI0002540D6D	UniProt:M4DMX9	MapMan:50.2.7

Description

AT4G40010 (E=6e-020) SNRK2-7, SNRK2.7, SRK2F | SNRK2.7 (SNF1-RELATED PROTEIN KINASE 2.7); kinase

Coordinates

chrA03:+:31100003..31101837

Molecular Weight (calculated)

13122.4 Da

IEP (calculated)

5.251

GRAVY (calculated)

-0.723

Length

115 amino acids

Sequence
(BLAST)

001: MFVIKQSSVL HSQPKSTVGT PAYVAPEVLS RKKYNGKALH FTIPDYVRIS SECKHLLSHI FVADPDKRIT VQEIEKHPWF LKNLLPGNSE GKCNGDKTGV
101: EQEEEEDDEE EEERL

Best Arabidopsis Sequence Match ( AT4G40010.1 )
(BLAST)

001: MERYDILRDL GSGNFGVAKL VREKANGEFY AVKYIERGLK IDEHVQREII NHRDLKHPNI IRFKEVFVTP THLAIVMEYA AGGELFERIC NAGRFSEDEG
101: RYYFKQLISG VSYCHAMQIC HRDLKLENTL LDGSPSSHLK ICDFGYSKSS VLHSQPKSTV GTPAYVAPEV LSRKEYNGKI ADVWSCGVTL YVMLVGAYPF
201: EDPEDPRNIR NTIQRILSVH YTIPDYVRIS SECKHLLSRI FVADPDKRIT VPEIEKHPWF LKGPLVVPPE EEKCDNGVEE EEEEEEKCRQ SVEEIVKIIE
301: EARKGVNGTD NNGGLGLIDG SIDLDDIDDA DIYDDVDDDE ERNGDFVCAL

Arabidopsis Description

SRK2FSerine/threonine-protein kinase SRK2F [Source:UniProtKB/Swiss-Prot;Acc:Q9SMQ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.