Factsheet for VIT_02s0236g00130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g077780.2.1	Tomato	cytosol	81.76	82.01
KRH57532	Soybean	cytosol, endoplasmic reticulum, nucleus	80.88	81.85
PGSC0003DMT400067426	Potato	cytosol	81.47	81.71
KRH04240	Soybean	cytosol	80.29	81.25
GSMUA_Achr5P12610_001	Banana	cytosol	79.71	79.94
KXG38898	Sorghum	cytosol	77.94	79.58
Zm00001d029975_P003	Maize	cytosol, extracellular	77.35	78.98
Os10t0564500-01	Rice	cytosol, plastid	76.76	78.14
VIT_18s0001g06310.t01	Wine grape	cytosol	75.59	76.72
TraesCS1D01G218200.1	Wheat	cytosol	76.76	76.32
TraesCS1B01G229400.1	Wheat	cytosol	76.47	76.02
TraesCS1A01G215900.1	Wheat	cytosol	76.47	76.02
HORVU1Hr1G055340.9	Barley	cytosol	76.18	75.95
VIT_00s0710g00020.t01	Wine grape	cytosol	75.29	75.74
VIT_07s0191g00070.t01	Wine grape	cytosol	75.29	75.74
VIT_07s0031g03210.t01	Wine grape	cytosol	74.12	70.99
VIT_03s0063g01080.t01	Wine grape	cytosol	74.41	69.7
VIT_07s0197g00080.t01	Wine grape	cytosol	73.53	69.25
VIT_12s0035g00310.t01	Wine grape	cytosol	72.35	69.1

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100243594	wikigene:100243594	MapMan:18.4.5.2	Gene3D:3.30.200.20	EMBL:AM479411
ProteinID:CAN62023	ProteinID:CAN62023.1	ProteinID:CBI23389	ProteinID:CBI23389.3	UniProt:D7SYT7	EMBL:FN595257
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100243594	wikigene:LOC100243594	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF214	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015CDF65	ArrayExpress:VIT_02s0236g00130	EnsemblPlantsGene:VIT_02s0236g00130
EnsemblPlants:VIT_02s0236g00130.t01	unigene:Vvi.10415	RefSeq:XP_002262726	RefSeq:XP_002262726.1	SEG:seg	:

Description

No Description!

Coordinates

chr2:-:5557576..5562111

Molecular Weight (calculated)

38603.2 Da

IEP (calculated)

5.810

GRAVY (calculated)

-0.354

Length

340 amino acids

Sequence
(BLAST)

001: MEERYDALKE LGSGNFGVAR LVRDKKTKEL VAVKYIERGK KIDENVQREI INHRSLRHPN IVRFKEVLLT PTHLAIVMEY AAGGELFERI CNAGRFSEDE
101: ARFFFQQLIS GVSYCHSMEI CHRDLKLENT LLDGSPMPRL KICDFGYSKS ALLHSQPKSA VGTPAYIAPE VLSRKEYDGK IADVWSCGVT LYVMLVGAYP
201: FEDPEDPRNF RKTIGRIMSV QYSIPDYVHV SAECRQLLSR IFVANPAKRI TIPEIKQHPW FLKNFPKELI EGEKTNYGEL HHDQLVQSVE EIMRIIQEAR
301: TPGEGSKVDG HSLDGALDSD DLEADLESEI DVSGEFMAPV

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.