Factsheet for HORVU1Hr1G073230.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G073230.1
HORVU2Hr1G031310.9
HORVU2Hr1G074740.2
HORVU2Hr1G074780.1
HORVU2Hr1G075470.2
HORVU3Hr1G085210.2
HORVU3Hr1G098530.4
HORVU4Hr1G060950.3
HORVU4Hr1G070980.1
HORVU4Hr1G087520.3
HORVU5Hr1G060730.3
HORVU5Hr1G062290.6
HORVU6Hr1G038010.6
HORVU7Hr1G075150.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39940.1	HORVU2Hr1G031310.9	AT1G19180.1	17637677
AT2G39940.1	HORVU5Hr1G062290.6	AT1G19180.1	17637677
AT2G39940.1	HORVU2Hr1G031310.9	AT1G19180.1	18547396
AT2G39940.1	HORVU5Hr1G062290.6	AT1G19180.1	18547396
AT2G39940.1	HORVU2Hr1G031310.9	AT1G74950.1	18547396
AT2G39940.1	HORVU5Hr1G062290.6	AT1G74950.1	18547396
AT2G39940.1	HORVU1Hr1G073230.1	AT2G39940.1	12724535
AT2G39940.1	HORVU3Hr1G085210.2	AT2G39940.1	12724535
AT2G39940.1	HORVU4Hr1G060950.3	AT2G39940.1	12724535
AT2G39940.1	HORVU4Hr1G087520.3	AT3G17860.1	17637675
AT2G39940.1	HORVU5Hr1G060730.3	AT3G17860.1	17637675
AT2G39940.1	HORVU4Hr1G087520.3	AT3G17860.1	18547396
AT2G39940.1	HORVU5Hr1G060730.3	AT3G17860.1	18547396
AT2G39940.1	HORVU4Hr1G087520.3	AT3G17860.1	19309455
AT2G39940.1	HORVU5Hr1G060730.3	AT3G17860.1	19309455
AT2G39940.1	HORVU3Hr1G098530.4	AT4G02570.1	12172031
AT2G39940.1	HORVU3Hr1G098530.4	AT4G02570.1	12445118
AT2G39940.1	HORVU3Hr1G098530.4	AT4G02570.1	12724535
AT2G39940.1	HORVU2Hr1G074740.2	AT4G14110.1	12724535
AT2G39940.1	HORVU2Hr1G074780.1	AT4G14110.1	12724535
AT2G39940.1	HORVU2Hr1G075470.2	AT5G08590.1	12172031
AT2G39940.1	HORVU2Hr1G075470.2	AT5G08590.1	14749489
AT2G39940.1	HORVU7Hr1G075150.4	AT5G14250.1	12724535
AT2G39940.1	HORVU4Hr1G070980.1	AT5G42970.1	12724535
AT2G39940.1	HORVU6Hr1G038010.6	AT5G63110.1	12445118

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G288100.1	Wheat	cytosol	94.59	94.43
TraesCS1D01G278400.1	Wheat	cytosol	93.91	93.75
TraesCS1A01G279100.1	Wheat	cytosol	93.57	93.41
Os05t0449500-01	Rice	cytosol	85.28	84.42
EES18318	Sorghum	cytosol	84.77	83.64
Zm00001d010082_P001	Maize	cytosol	83.76	82.64
Zm00001d038273_P001	Maize	cytosol	83.59	82.47
HORVU3Hr1G085210.2	Barley	cytosol	79.19	78.79
GSMUA_Achr6P33630_001	Banana	cytosol, mitochondrion, nucleus	64.47	65.35
GSMUA_Achr5P28930_001	Banana	cytosol	61.42	64.82
GSMUA_Achr9P03690_001	Banana	cytosol	64.64	63.35
HORVU4Hr1G060950.3	Barley	cytosol	62.61	63.14
VIT_13s0019g03380.t01	Wine grape	cytosol	60.74	60.03
KRG97777	Soybean	cytosol	57.53	57.63
KRH31107	Soybean	cytosol	57.36	57.46
GSMUA_Achr8P02350_001	Banana	cytosol	16.41	56.4
KRH14993	Soybean	cytosol	53.98	56.16
CDY24941	Canola	cytosol	56.01	56.1
Bra000156.1-P	Field mustard	cytosol	56.01	56.1
KRH73146	Soybean	cytosol	54.99	55.65
AT2G39940.1	Thale cress	cytosol	55.33	55.24
Solyc05g052620.2.1	Tomato	cytosol	56.01	54.89
CDY20501	Canola	cytosol	54.99	53.99
Bra005000.1-P	Field mustard	cytosol	54.82	53.73
CDX74819	Canola	cytosol	54.48	53.67
CDX93223	Canola	cytosol	53.13	53.13
CDX93225	Canola	cytosol	53.13	52.86
CDY07041	Canola	cytosol	52.28	52.2
CDY07040	Canola	cytosol	53.47	52.06
Bra017045.1-P	Field mustard	cytosol	53.13	51.73
Bra017044.1-P	Field mustard	cytosol	52.28	51.16
CDY60996	Canola	endoplasmic reticulum, golgi	55.84	46.94
HORVU5Hr1G075620.2	Barley	cytosol	30.96	32.22
HORVU2Hr1G070800.1	Barley	cytosol	30.46	31.36
HORVU4Hr1G080360.1	Barley	cytosol, peroxisome, plastid	16.24	27.99
HORVU4Hr1G015730.1	Barley	cytosol, peroxisome, plastid	15.4	27.25
HORVU6Hr1G077570.1	Barley	mitochondrion	28.93	27.23
HORVU6Hr1G021040.2	Barley	extracellular	6.43	27.14
HORVU4Hr1G078120.4	Barley	cytosol, plastid	30.12	26.1
HORVU1Hr1G021550.4	Barley	cytosol	28.26	26.01

Protein Annotations

Gene3D:1.20.1280.50	MapMan:11.7.2.1.1	Gene3D:3.80.10.10	EMBL:AK355009	EMBL:AK363130	EMBL:AK364467
InterPro:F-box-like_dom_sf	UniProt:F2CTQ7	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009987	GO:GO:2000022	EnsemblPlantsGene:HORVU1Hr1G073230
EnsemblPlants:HORVU1Hr1G073230.1	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR43944	PANTHER:PTHR43944:SF3
SMART:SM00367	SUPFAM:SSF52047	SUPFAM:SSF81383	UniParc:UPI0002004E2D	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CTQ7]

Coordinates

chrchr1H:+:502081021..502084952

Molecular Weight (calculated)

65530.6 Da

IEP (calculated)

7.175

GRAVY (calculated)

0.016

Length

591 amino acids

Sequence
(BLAST)

001: MGGEAPEPRR LTRALSVDGS GVPEEALHLV FGYVDDPRDR EAASLACRRW HHIDALTRKH VTVPFCYAVS PARLLARFPR LESLGVKGKP RAAMYGLISD
101: DWGAYARPWI AELAAPLECL KALHLRRMVV TDDDLAALVL ARGHMLQELK LDKCSGFSTD ALRLVARSCR SLRTLFLEEC TITDNGTEWL HDLAANNPVL
201: VNLNFYLTYL RAVPADLELL ARNCKSLISL KISDCDLSDL VGFFQIATSL QEFAGAEISE QMYGNVKFPS KICSFGLTFM GINEMHIIFP FSAVLKKLDL
301: QYSFLTTEDH CQLIAKCPNL LVLAVRNVIG DRGLAVVGDT CKKLQRLRVE RGEDDPGMQE EGGVSQVGLT AVAVGCRELE YIAAYVSDIT NGALESIGTF
401: CKKLYDFRLV LLDRQERITD LPLDNGARAL LRGCTKLRRF ALYLRPGGLS DVGLNYIGQH SGTIHYMLLG NVGQTDDGLI SFAAGCRNLL KLELRSCCFS
501: ERALALAVLK MPSLRYVWVQ GYRASQTGRD LMLMARPFWN IEFTPPGTES AGRLMEDGEP CVDRQAQVLA YYSLSGRRSD CPQSVVPLYP A

Best Arabidopsis Sequence Match ( AT2G39940.1 )
(BLAST)

001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI

Arabidopsis Description

COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.