CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92157
EER92695
EER95129
EER97533
EER98873
EER98969
EES01769
EES04173
EES06943
EES13281
EES13744
EES15016
EES18318
KXG26327
OQU81583

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39940.1	EER92157	AT1G19180.1	17637677
AT2G39940.1	EER97533	AT1G19180.1	17637677
AT2G39940.1	EER98969	AT1G19180.1	17637677
AT2G39940.1	EER92157	AT1G19180.1	18547396
AT2G39940.1	EER97533	AT1G19180.1	18547396
AT2G39940.1	EER98969	AT1G19180.1	18547396
AT2G39940.1	EER92157	AT1G74950.1	18547396
AT2G39940.1	EER97533	AT1G74950.1	18547396
AT2G39940.1	EER98969	AT1G74950.1	18547396
AT2G39940.1	EER95129	AT2G39940.1	12724535
AT2G39940.1	EES01769	AT2G39940.1	12724535
AT2G39940.1	EES18318	AT2G39940.1	12724535
AT2G39940.1	EER98873	AT3G17860.1	17637675
AT2G39940.1	EES15016	AT3G17860.1	17637675
AT2G39940.1	EER98873	AT3G17860.1	18547396
AT2G39940.1	EES15016	AT3G17860.1	18547396
AT2G39940.1	EER98873	AT3G17860.1	19309455
AT2G39940.1	EES15016	AT3G17860.1	19309455
AT2G39940.1	EES04173	AT4G02570.1	12172031
AT2G39940.1	EES04173	AT4G02570.1	12445118
AT2G39940.1	EES04173	AT4G02570.1	12724535
AT2G39940.1	OQU81583	AT4G14110.1	12724535
AT2G39940.1	EES06943	AT5G08590.1	12172031
AT2G39940.1	KXG26327	AT5G08590.1	12172031
AT2G39940.1	EES06943	AT5G08590.1	14749489
AT2G39940.1	KXG26327	AT5G08590.1	14749489
AT2G39940.1	EES13281	AT5G14250.1	12724535
AT2G39940.1	EER92695	AT5G42970.1	12724535
AT2G39940.1	EES13744	AT5G63110.1	12445118

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010082_P001	Maize	cytosol	94.99	94.99
Zm00001d038273_P001	Maize	cytosol	93.66	93.66
Os05t0449500-01	Rice	cytosol	86.98	87.27
TraesCS1D01G278400.1	Wheat	cytosol	84.64	85.64
TraesCS1B01G288100.1	Wheat	cytosol	84.47	85.47
TraesCS1A01G279100.1	Wheat	cytosol	83.81	84.8
HORVU1Hr1G073230.1	Barley	cytosol	83.64	84.77
EES01769	Sorghum	cytosol	78.96	79.36
GSMUA_Achr6P33630_001	Banana	cytosol, mitochondrion, nucleus	66.11	67.92
GSMUA_Achr5P28930_001	Banana	cytosol	62.27	66.61
GSMUA_Achr9P03690_001	Banana	cytosol	65.11	64.68
EER95129	Sorghum	cytosol	60.77	61.59
VIT_13s0019g03380.t01	Wine grape	cytosol	60.93	61.04
GSMUA_Achr8P02350_001	Banana	cytosol	16.86	58.72
KRG97777	Soybean	cytosol	57.26	58.14
KRH31107	Soybean	cytosol	57.1	57.97
KRH73146	Soybean	cytosol	55.93	57.36
KRH14993	Soybean	cytosol	54.26	57.22
CDY24941	Canola	cytosol	55.93	56.78
Bra000156.1-P	Field mustard	cytosol	55.76	56.61
AT2G39940.1	Thale cress	cytosol	55.76	56.42
Solyc05g052620.2.1	Tomato	cytosol	55.76	55.39
CDY20501	Canola	cytosol	55.59	55.32
Bra005000.1-P	Field mustard	cytosol	55.43	55.06
CDX74819	Canola	cytosol	55.09	55.0
CDX93223	Canola	cytosol	54.09	54.82
CDX93225	Canola	cytosol	54.26	54.71
CDY07041	Canola	cytosol	53.09	53.72
CDY07040	Canola	cytosol	54.42	53.71
Bra017045.1-P	Field mustard	cytosol	54.09	53.38
Bra017044.1-P	Field mustard	cytosol	52.92	52.48
CDY60996	Canola	endoplasmic reticulum, golgi	55.59	47.37
EES09791	Sorghum	cytosol	31.39	32.53
KXG26136	Sorghum	cytosol	31.22	31.53
EER92735	Sorghum	cytosol	30.55	30.4
KXG21312	Sorghum	plastid	28.71	29.1
EES05842	Sorghum	plastid	31.72	28.7

Protein Annotations

Gene3D:1.20.1280.50	MapMan:11.7.2.1.1	Gene3D:3.80.10.10	EntrezGene:8061747	UniProt:C5YYV2	EnsemblPlants:EES18318
ProteinID:EES18318	ProteinID:EES18318.1	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009987	GO:GO:2000022
InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR43944	PANTHER:PTHR43944:SF3	EnsemblPlantsGene:SORBI_3009G157200	SUPFAM:SSF52047
SUPFAM:SSF81383	unigene:Sbi.1015	UniParc:UPI0001A88875	RefSeq:XP_002439888.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:51480218..51483682

Molecular Weight (calculated)

66433.8 Da

IEP (calculated)

6.355

GRAVY (calculated)

0.000

Length

599 amino acids

Sequence
(BLAST)

001: MGGEAPEPRR LTRALSIGGG DGGWVPEEML HLVMGFVEDP RDREAASLVC RRWHRVDALS RKHVTVPFCY AVSPARLLAR FPRLESLAIK GKPRAAMYGL
101: IPDDWGAYAR PWVAELAAPL ECLKALHLRR MVVTDDDLAE LVRARGHMLQ ELKLDKCTGF STDGLRLVAR SCRSLRTLFL EECQINDKGS EWIHDLADGC
201: PVLTTLNFHM TELQVMPADL EFLARSCKSL ISLKISDCDV SDLIGFFQFA TALEEFAGGT FNEQGELTMY GNVRFPSRLC SLGLTFMGTN EMPIIFPFSA
301: ILKKLDLQYT VLTTEDHCQL IAKCPNLLVL AVRNVIGDRG LGVVADTCKK LQRLRIERGD DEGGVQEEQG GVSQVGLTAI AVGCRELEYI AAYVSDITNG
401: ALESIGTFCK KLYDFRLVLL DREERITELP LDNGVRALLR GCTKLRRFAL YLRPGGLSDA GLGYIGQCSG NIQYMLLGNV GETDDGLFSF ALGCVNLRKL
501: ELRSCCFSER ALALAILRMP SLRYVWVQGY KASQTGRDLM LMARPFWNIE FTPPSSENAG RLMEDGEPCV DSHAQILAYH SLAGKRLDCP QSVVPLYPA

Best Arabidopsis Sequence Match ( AT2G39940.1 )
(BLAST)

001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI

Arabidopsis Description

COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.