Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042833_P001 | Maize | cytosol | 93.96 | 93.65 |
| Zm00001d012338_P001 | Maize | cytosol | 93.62 | 93.62 |
| Os01t0853400-01 | Rice | cytosol | 84.4 | 84.54 |
| TraesCS3A01G367500.1 | Wheat | cytosol | 78.36 | 83.84 |
| TraesCS3D01G360400.2 | Wheat | cytosol | 83.56 | 83.7 |
| TraesCS3B01G399200.1 | Wheat | cytosol | 83.05 | 83.33 |
| HORVU3Hr1G085210.2 | Barley | cytosol | 83.05 | 83.33 |
| EES18318 | Sorghum | cytosol | 79.36 | 78.96 |
| GSMUA_Achr5P28930_001 | Banana | cytosol | 63.42 | 67.5 |
| GSMUA_Achr6P33630_001 | Banana | cytosol, mitochondrion, nucleus | 65.6 | 67.07 |
| GSMUA_Achr9P03690_001 | Banana | cytosol | 65.44 | 64.68 |
| EER95129 | Sorghum | cytosol | 61.07 | 61.59 |
| VIT_13s0019g03380.t01 | Wine grape | cytosol | 59.23 | 59.03 |
| KRH31107 | Soybean | cytosol | 57.21 | 57.8 |
| KRG97777 | Soybean | cytosol | 57.21 | 57.8 |
| GSMUA_Achr8P02350_001 | Banana | cytosol | 16.61 | 57.56 |
| KRH14993 | Soybean | cytosol | 53.86 | 56.51 |
| KRH73146 | Soybean | cytosol | 55.37 | 56.51 |
| CDY24941 | Canola | cytosol | 55.54 | 56.1 |
| Bra000156.1-P | Field mustard | cytosol | 55.37 | 55.93 |
| Solyc05g052620.2.1 | Tomato | cytosol | 55.87 | 55.22 |
| AT2G39940.1 | Thale cress | cytosol | 54.7 | 55.07 |
| CDY20501 | Canola | cytosol | 54.53 | 53.99 |
| CDX93223 | Canola | cytosol | 53.52 | 53.98 |
| CDX93225 | Canola | cytosol | 53.69 | 53.87 |
| Bra005000.1-P | Field mustard | cytosol | 54.36 | 53.73 |
| CDY07041 | Canola | cytosol | 53.19 | 53.55 |
| CDX74819 | Canola | cytosol | 53.86 | 53.5 |
| CDY07040 | Canola | cytosol | 54.19 | 53.21 |
| Bra017045.1-P | Field mustard | cytosol | 53.86 | 52.88 |
| Bra017044.1-P | Field mustard | cytosol | 53.02 | 52.32 |
| CDY60996 | Canola | endoplasmic reticulum, golgi | 55.2 | 46.8 |
| EES09791 | Sorghum | cytosol | 29.87 | 30.8 |
| KXG26136 | Sorghum | cytosol | 30.54 | 30.69 |
| EER92735 | Sorghum | cytosol | 30.03 | 29.73 |
| KXG21312 | Sorghum | plastid | 28.36 | 28.6 |
| EES05842 | Sorghum | plastid | 30.87 | 27.79 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:11.7.2.1.1 | Gene3D:3.80.10.10 | EntrezGene:8058923 | UniProt:C5XPW1 | EnsemblPlants:EES01769 |
| ProteinID:EES01769 | ProteinID:EES01769.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0002213 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:2000022 | InterPro:IPR001810 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | PFAM:PF12937 | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF3 | EnsemblPlantsGene:SORBI_3003G359600 |
| SUPFAM:SSF52047 | SUPFAM:SSF81383 | unigene:Sbi.15090 | UniParc:UPI0001A8467E | RefSeq:XP_002456649.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:+:67693621..67697264
Molecular Weight (calculated)
66527.0 Da
IEP (calculated)
7.249
GRAVY (calculated)
-0.001
Length
596 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGELPEPSR LRRALSFGCG AVPEEALHLV FGYVDDPRDR EAASLVCRRW HRIDALSRKH VTVGFCYAVE PARLLARFPR LESLALKGRP RAAMYGLIPE
101: DFGAYAAPWV AQLAAPLDCL KALHLRRMTV TDEDIAVLVR ARGYMLQVLK LDKCSGFSTD ALRLVARSCR SLRTLFLEEC TIADEGSEWL HELAVNNSVL
201: VTLNFYMTDL RVEPADLELL AKNCKSLISL KMSECDLSDL IGFLQTSKGL QEFAGGAFSE VGEYTKYEKV KFPPRLCFLG GLTFMSKNEM QVIFPYSAML
301: KKLDLQYTCL TTEDHCQLIA KCPNLLVLEV RNVIGDRGLE VVGDTCKKLR RLRIERGDDD PGQEEQGGVS QIGLTAVAVG CRELEYIAAY VSDITNGALE
401: SIGTFCKNLY DFRLVLLDKQ NKIADLPLDN GVRALLRNCT KLRRFAFYLR PGGLSDVGLG YIGLYSGNIQ YMLLGNVGES DNGLIQFAMG CTNLRKLELR
501: SCCFSERALA VAVLQMPLLR YIWVQGYRAS QTGQDLMLMA RPYWNIEFVP PGPESAYRVM ADGQPCVDTH AQVLAYYSLA GRRPDCPQWL VTLHPA
101: DFGAYAAPWV AQLAAPLDCL KALHLRRMTV TDEDIAVLVR ARGYMLQVLK LDKCSGFSTD ALRLVARSCR SLRTLFLEEC TIADEGSEWL HELAVNNSVL
201: VTLNFYMTDL RVEPADLELL AKNCKSLISL KMSECDLSDL IGFLQTSKGL QEFAGGAFSE VGEYTKYEKV KFPPRLCFLG GLTFMSKNEM QVIFPYSAML
301: KKLDLQYTCL TTEDHCQLIA KCPNLLVLEV RNVIGDRGLE VVGDTCKKLR RLRIERGDDD PGQEEQGGVS QIGLTAVAVG CRELEYIAAY VSDITNGALE
401: SIGTFCKNLY DFRLVLLDKQ NKIADLPLDN GVRALLRNCT KLRRFAFYLR PGGLSDVGLG YIGLYSGNIQ YMLLGNVGES DNGLIQFAMG CTNLRKLELR
501: SCCFSERALA VAVLQMPLLR YIWVQGYRAS QTGQDLMLMA RPYWNIEFVP PGPESAYRVM ADGQPCVDTH AQVLAYYSLA GRRPDCPQWL VTLHPA
001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
Arabidopsis Description
COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.