Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24390.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT4G24390.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT4G24390.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT4G24390.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT4G24390.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34286 | Canola | cytosol | 96.23 | 96.39 |
| AT4G24390.1 | Thale cress | cytosol, plastid | 84.26 | 82.5 |
| CDX83172 | Canola | cytosol, plastid | 77.05 | 77.43 |
| CDY21439 | Canola | cytosol | 76.39 | 77.15 |
| VIT_18s0001g07120.t01 | Wine grape | cytosol | 69.18 | 71.04 |
| KRH52925 | Soybean | cytosol | 62.79 | 65.25 |
| KRH62206 | Soybean | cytosol | 62.3 | 65.18 |
| KRH72427 | Soybean | cytosol | 66.89 | 64.76 |
| PGSC0003DMT400005419 | Potato | cytosol | 64.43 | 64.11 |
| Solyc04g074980.2.1 | Tomato | cytosol | 65.25 | 63.88 |
| KRH16819 | Soybean | cytosol | 66.72 | 63.59 |
| HORVU4Hr1G080360.1 | Barley | cytosol, peroxisome, plastid | 35.57 | 63.27 |
| GSMUA_Achr3P06710_001 | Banana | cytosol | 58.36 | 62.13 |
| HORVU4Hr1G015730.1 | Barley | cytosol, peroxisome, plastid | 33.93 | 61.98 |
| Os03t0187500-01 | Rice | cytosol | 25.41 | 61.51 |
| GSMUA_Achr7P11780_001 | Banana | cytosol | 58.03 | 60.0 |
| GSMUA_Achr5P05520_001 | Banana | cytosol | 57.54 | 59.8 |
| Os02t0759700-01 | Rice | cytosol | 61.97 | 59.34 |
| HORVU6Hr1G077570.1 | Barley | mitochondrion | 59.84 | 58.12 |
| TraesCS7B01G081200.1 | Wheat | cytosol | 59.34 | 57.92 |
| TraesCS7A01G176200.1 | Wheat | cytosol | 59.18 | 57.85 |
| TraesCS7D01G177500.1 | Wheat | cytosol, plastid | 59.51 | 57.71 |
| TraesCS6B01G345800.1 | Wheat | plastid | 60.49 | 57.21 |
| TraesCS6A01G315300.1 | Wheat | plastid | 60.66 | 57.19 |
| TraesCS6D01G294600.1 | Wheat | plastid | 60.66 | 57.1 |
| EES05842 | Sorghum | plastid | 61.64 | 56.8 |
| Zm00001d052188_P001 | Maize | plastid | 61.48 | 56.31 |
| Zm00001d018126_P001 | Maize | plastid | 61.31 | 56.24 |
| TraesCS4D01G301800.1 | Wheat | cytosol, nucleus, peroxisome | 54.92 | 54.92 |
| TraesCS4A01G001800.1 | Wheat | cytosol | 54.59 | 54.77 |
| Zm00001d027975_P001 | Maize | cytosol | 52.46 | 53.51 |
| EER92735 | Sorghum | cytosol | 52.46 | 53.16 |
| Zm00001d048233_P001 | Maize | cytosol | 51.97 | 53.01 |
| CDY28523 | Canola | cytosol | 47.38 | 50.26 |
| CDY34211 | Canola | cytosol | 47.05 | 49.91 |
| CDY26594 | Canola | cytosol | 46.39 | 48.96 |
| CDY16034 | Canola | cytosol | 46.39 | 48.88 |
| HORVU4Hr1G078120.4 | Barley | cytosol, plastid | 54.59 | 48.83 |
| CDX71968 | Canola | cytosol | 46.23 | 48.79 |
| CDY31282 | Canola | cytosol | 46.56 | 48.38 |
| CDY21068 | Canola | cytosol | 46.39 | 47.97 |
| CDY68868 | Canola | cytosol | 42.46 | 47.96 |
| CDY53998 | Canola | cytosol | 45.57 | 47.6 |
| CDY53774 | Canola | cytosol | 45.25 | 47.1 |
| CDX90899 | Canola | cytosol | 44.75 | 46.59 |
| CDX76680 | Canola | cytosol | 45.41 | 46.55 |
| CDY11468 | Canola | cytosol | 45.08 | 46.22 |
| CDX67912 | Canola | endoplasmic reticulum, golgi | 45.9 | 43.41 |
| CDY21947 | Canola | plastid, vacuole | 44.1 | 42.97 |
| CDY22108 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 44.59 | 42.57 |
| CDX89163 | Canola | cytosol | 41.15 | 40.1 |
| CDY24941 | Canola | cytosol | 29.51 | 30.51 |
| CDY20501 | Canola | cytosol | 29.51 | 29.9 |
| CDX74819 | Canola | cytosol | 29.18 | 29.67 |
| CDY07041 | Canola | cytosol | 28.52 | 29.39 |
| CDX97301 | Canola | cytosol | 4.43 | 29.35 |
| CDX93223 | Canola | cytosol | 28.03 | 28.93 |
| CDX93225 | Canola | cytosol | 27.7 | 28.45 |
| CDY07040 | Canola | cytosol | 27.87 | 28.01 |
| CDY60996 | Canola | endoplasmic reticulum, golgi | 29.34 | 25.46 |
Protein Annotations
| EnsemblPlants:CDY03450 | EnsemblPlantsGene:GSBRNA2T00116104001 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF8 | ProteinID:CDY03450 | ProteinID:CDY03450.1 | SEG:seg |
| SMART:SM00367 | SUPFAM:SSF52047 | UniParc:UPI0004EEB31B | MapMan:11.2.2.1.1 | MapMan:19.2.2.8.1.4.6 | : |
Description
BnaC01g16320D
Coordinates
chrLK031943:+:531544..534202
Molecular Weight (calculated)
68245.5 Da
IEP (calculated)
4.945
GRAVY (calculated)
-0.167
Length
610 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEDLSEMA KDVERHLKLD PPESSSPPPC PSHVLENVLE NVLKFLTSKR DRNAVSLVCR SWHRVEAQTR FEVFIGNCYS LSPARLTRRF TRVRSLFLKG
101: KPRFADFNLM PPDWGAQFAP WVAATAKAYP WLEKVSLKRM FVSDDDLALL AASFPGFKEL VLLCCEGFGT SGVAVVANKC RQLKVLDLIE SEVTDDEVDW
201: ISCFPEGETH LESLSFDCVE SPINFKALEG LVVRSPFLKK LRTNRFVSLE ELHTLMVRAP QLTSLGTGAF SSTHDGAQGE QEPDYASAFR ACRSLVCLSG
301: FRELTVEYLP AISPVCANLT SLNFSYANIS PDVFKPIIRN CHNIRVFWAL DSIGDEGLQA VAETCKELRE LRIFPFDPSE DSEGPVSGLG LQAISEGCKK
401: LESILYFCQR MTNVAVTAMS ENCPQLTVFR LCIMGRHRPD HVTRKPMDDG FGAIVKNCKK LTRLAVSGLL TDQAFSLIGE YGKLIRTLSV AFAGDSDMGL
501: RYILEGCPKL EKLEIRDSPF GDVGLRSGMH RYNEMRFVWM SSCRLSRGAC RDVAHTLPSV VVEVFGSDDD DDDDDDDDDE DDNADYVETL YMYRSLDGPR
601: KDAPKFVTIL
101: KPRFADFNLM PPDWGAQFAP WVAATAKAYP WLEKVSLKRM FVSDDDLALL AASFPGFKEL VLLCCEGFGT SGVAVVANKC RQLKVLDLIE SEVTDDEVDW
201: ISCFPEGETH LESLSFDCVE SPINFKALEG LVVRSPFLKK LRTNRFVSLE ELHTLMVRAP QLTSLGTGAF SSTHDGAQGE QEPDYASAFR ACRSLVCLSG
301: FRELTVEYLP AISPVCANLT SLNFSYANIS PDVFKPIIRN CHNIRVFWAL DSIGDEGLQA VAETCKELRE LRIFPFDPSE DSEGPVSGLG LQAISEGCKK
401: LESILYFCQR MTNVAVTAMS ENCPQLTVFR LCIMGRHRPD HVTRKPMDDG FGAIVKNCKK LTRLAVSGLL TDQAFSLIGE YGKLIRTLSV AFAGDSDMGL
501: RYILEGCPKL EKLEIRDSPF GDVGLRSGMH RYNEMRFVWM SSCRLSRGAC RDVAHTLPSV VVEVFGSDDD DDDDDDDDDE DDNADYVETL YMYRSLDGPR
601: KDAPKFVTIL
001: MTEEDSSAKM SEDVEKYLNL NPPCSSSSSS SSAATFTNKS RNFKSSPPPC PDHVLENVLE NVLQFLTSRC DRNAVSLVCR SWYRVEAQTR LEVFIGNCYS
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL
Arabidopsis Description
FBX14F-box protein FBX14 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWQ8]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.