Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G081200.1 | Wheat | cytosol | 98.08 | 97.92 |
| TraesCS7D01G177500.1 | Wheat | cytosol, plastid | 97.92 | 97.14 |
| TraesCS6A01G315300.1 | Wheat | plastid | 78.21 | 75.42 |
| VIT_18s0001g07120.t01 | Wine grape | cytosol | 62.82 | 65.99 |
| GSMUA_Achr3P06710_001 | Banana | cytosol | 60.42 | 65.79 |
| GSMUA_Achr5P05520_001 | Banana | cytosol | 60.58 | 64.4 |
| KRH62206 | Soybean | cytosol | 59.29 | 63.46 |
| KRH52925 | Soybean | cytosol | 58.65 | 62.35 |
| PGSC0003DMT400005419 | Potato | cytosol | 60.74 | 61.83 |
| Solyc04g074980.2.1 | Tomato | cytosol | 61.06 | 61.16 |
| Bra000604.1-P | Field mustard | cytosol, plastid | 58.17 | 59.8 |
| CDY21439 | Canola | cytosol | 57.69 | 59.6 |
| CDX83172 | Canola | cytosol, plastid | 57.85 | 59.47 |
| CDY03450 | Canola | cytosol | 57.85 | 59.18 |
| KRH72427 | Soybean | cytosol | 59.62 | 59.05 |
| AT4G24390.1 | Thale cress | cytosol, plastid | 58.81 | 58.91 |
| Bra013798.1-P | Field mustard | cytosol | 57.21 | 58.81 |
| AT5G49980.1 | Thale cress | nucleus | 58.17 | 58.64 |
| CDY34286 | Canola | cytosol | 57.05 | 58.46 |
| KRH16819 | Soybean | cytosol | 59.78 | 58.28 |
| TraesCS4A01G001800.1 | Wheat | cytosol | 54.49 | 55.92 |
| TraesCS2A01G286200.1 | Wheat | cytosol | 45.19 | 49.13 |
| TraesCS5A01G281100.1 | Wheat | cytosol | 43.27 | 47.45 |
| TraesCS1A01G091300.1 | Wheat | cytosol | 42.63 | 44.93 |
| TraesCS3A01G367500.1 | Wheat | cytosol | 29.65 | 33.21 |
| TraesCS1A01G279100.1 | Wheat | cytosol | 29.17 | 30.74 |
| TraesCS4A01G091200.1 | Wheat | cytosol | 28.37 | 30.2 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G176200.1 | EnsemblPlantsGene:TraesCS7A01G176200 | Gene3D:1.20.1280.50 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_Cys-con_subtyp | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF8 | SEG:seg | SMART:SM00367 | SUPFAM:SSF52047 |
| MapMan:11.2.2.1.1 | MapMan:19.2.2.8.1.4.6 | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:129259578..129262671
Molecular Weight (calculated)
68731.3 Da
IEP (calculated)
5.154
GRAVY (calculated)
-0.101
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGAAEEADS PPTHMSDDSS PGSSSSSGGR RTPDLRGGDN GGGPRSSSSA PPDQVLDNVL ESVLEFLTAA RDRNAASLVC RSWYRAEAQT RRELFIGNCY
101: AVDPRRAVQR FRAVAAVVLK GKPRFADFSL LPDGWGANVK PWLEALGPAY PCLERICLKR MTVTDDDLGL VARSFPGFKE LSLVCCDGFS TLGLAVIAER
201: CRHLRVLDLI EDYVDQEDEA VDWISKFPVS NTSLESLMFD CVAVPFNFEA LEALVARSPS LRRLRVNHYV SVEQLRRLMA RAPQLTHLGT GAFRPEAPQG
301: GGMSVSELAP SFAASTSIVC LSGFQEVNPE YLPAIYPVCG NLTSLNVSFA SLTAEDLTPV IRQCHKLQTF WVLDTAGDEC LRAVAETCSD LRELRVFPLD
401: ATEDSDGSVS DVGLQAISEG CRKLESILYF CQRMTNAAVV AMSNNCPDLV VFRLCIMGRH RPDRITGEPM DDGFGAIVKN CKKLTRLSVS GLLTDKAFAY
501: IGQYGKLIKT LSLAFSGNSD LSLQFLFEGC TRLQKLEVRD SPFSDRGLLC GLDYFYNMRF LWMNSCRLTM RGCREVAQRM PNLVVEVMEE QNEDKVETET
601: VDKLYLYRSL AGPRGDAPPL VKIL
101: AVDPRRAVQR FRAVAAVVLK GKPRFADFSL LPDGWGANVK PWLEALGPAY PCLERICLKR MTVTDDDLGL VARSFPGFKE LSLVCCDGFS TLGLAVIAER
201: CRHLRVLDLI EDYVDQEDEA VDWISKFPVS NTSLESLMFD CVAVPFNFEA LEALVARSPS LRRLRVNHYV SVEQLRRLMA RAPQLTHLGT GAFRPEAPQG
301: GGMSVSELAP SFAASTSIVC LSGFQEVNPE YLPAIYPVCG NLTSLNVSFA SLTAEDLTPV IRQCHKLQTF WVLDTAGDEC LRAVAETCSD LRELRVFPLD
401: ATEDSDGSVS DVGLQAISEG CRKLESILYF CQRMTNAAVV AMSNNCPDLV VFRLCIMGRH RPDRITGEPM DDGFGAIVKN CKKLTRLSVS GLLTDKAFAY
501: IGQYGKLIKT LSLAFSGNSD LSLQFLFEGC TRLQKLEVRD SPFSDRGLLC GLDYFYNMRF LWMNSCRLTM RGCREVAQRM PNLVVEVMEE QNEDKVETET
601: VDKLYLYRSL AGPRGDAPPL VKIL
001: MTEEDSSAKM SEDVEKYLNL NPPCSSSSSS SSAATFTNKS RNFKSSPPPC PDHVLENVLE NVLQFLTSRC DRNAVSLVCR SWYRVEAQTR LEVFIGNCYS
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL
101: LSPARLIHRF KRVRSLVLKG KPRFADFNLM PPNWGAQFSP WVAATAKAYP WLEKVHLKRM FVTDDDLALL AESFPGFKEL TLVCCEGFGT SGIAIVANKC
201: RQLKVLDLME SEVTDDELDW ISCFPEGETH LESLSFDCVE SPINFKALEE LVVRSPFLKK LRTNRFVSLE ELHRLMVRAP QLTSLGTGSF SPDNVPQGEQ
301: QPDYAAAFRA CKSIVCLSGF REFRPEYLLA ISSVCANLTS LNFSYANISP HMLKPIISNC HNIRVFWALD SIRDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSGVGL QAISEGCRKL ESILYFCQNM TNGAVTAMSE NCPQLTVFRL CIMGRHRPDH VTGKPMDDGF GAIVKNCKKL TRLAVSGLLT DEAFSYIGEY
501: GKLIRTLSVA FAGNSDKALR YVLEGCPKLQ KLEIRDSPFG DVGLRSGMHR YSNMRFVWLS SCLISRGGCR GVSHALPNVV VEVFGADGDD DEDTVTGDYV
601: ETLYLYRSLD GPRKDAPKFV TIL
Arabidopsis Description
FBX14F-box protein FBX14 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWQ8]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.