Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023453.1-P | Field mustard | cytosol | 98.12 | 98.12 |
| CDX91076 | Canola | cytosol | 96.0 | 95.77 |
| CDX78568 | Canola | cytosol | 86.59 | 87.41 |
| AT5G14250.1 | Thale cress | cytosol | 79.76 | 79.02 |
| CDX78656 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 41.18 | 69.72 |
| CDX70553 | Canola | mitochondrion | 58.59 | 68.22 |
| VIT_14s0171g00270.t01 | Wine grape | cytosol | 65.88 | 66.04 |
| KRH57651 | Soybean | cytosol | 64.94 | 65.25 |
| KRG94317 | Soybean | cytosol | 63.53 | 63.83 |
| PGSC0003DMT400052100 | Potato | cytosol | 63.06 | 62.62 |
| Solyc02g093920.2.1 | Tomato | cytosol | 63.06 | 62.62 |
| GSMUA_Achr11P... | Banana | cytosol | 57.18 | 57.58 |
| Os08t0119000-01 | Rice | cytosol | 56.0 | 55.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.65 | 55.61 |
| EES13281 | Sorghum | cytosol | 55.06 | 54.55 |
| TraesCS7D01G312600.2 | Wheat | cytosol | 53.65 | 53.4 |
| TraesCS7B01G216600.2 | Wheat | cytosol | 53.41 | 53.16 |
| Zm00001d049652_P001 | Maize | cytosol | 52.71 | 52.71 |
| TraesCS7A01G315600.1 | Wheat | cytosol | 50.59 | 50.59 |
| Zm00001d035130_P001 | Maize | cytosol | 55.06 | 50.21 |
| Zm00001d028517_P001 | Maize | cytosol | 12.0 | 46.36 |
| HORVU7Hr1G075150.4 | Barley | mitochondrion | 52.94 | 46.2 |
| CDY26433 | Canola | mitochondrion | 47.06 | 45.45 |
Protein Annotations
| Gene3D:1.25.40.570 | MapMan:19.2.3.3.1.3 | EnsemblPlants:CDX85608 | ProteinID:CDX85608 | ProteinID:CDX85608.1 | InterPro:CSN3 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008180 | EnsemblPlantsGene:GSBRNA2T00143332001 |
| InterPro:IPR000717 | InterPro:PCI_dom | PFAM:PF01399 | PFscan:PS50250 | PANTHER:PTHR10758 | PANTHER:PTHR10758:SF1 |
| SMART:SM00088 | SMART:SM00753 | SUPFAM:SSF46785 | UniParc:UPI0004EEF53F | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
BnaA02g02050D
Coordinates
chrLK031842:-:852029..855097
Molecular Weight (calculated)
47580.6 Da
IEP (calculated)
6.066
GRAVY (calculated)
-0.064
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTENLITS IQGLSASSGD LSALHRILKG AEETLRADSD LELSTLEELD ASKHSLGYLY LLDVLTCGPM SNEKALDVVL LISRFISSCD AEQIRIASDK
101: FVSLCKRFKD RVLELEDPLR GVAPLLSAVR KVQVSSKRLT ALHPDCLQLC LLAKCYKAGF SILSDDILEV DQPRDFYLYC YYGGMICIGQ KKFQKALELL
201: YNVVTAPMHS VNAIALEAYK KYILVTLIHS GQFSVSLPKC ASTAAQRHLK TWSLPYTEVG NCYNEGKISE LQAVVVAHSS DFEKDNNLGL VKQAVSSLYK
301: RNILRLTQKY LTLSLQDIAN MVQLANAKEA EMHVLQMIQD GQIHALINQK DGMVRFLEDP EQYKTSEMIE VMDSVIQRTI GLSKNLIAMD ESLSCDPLYL
401: GKVGRERQRY DFGEDFDTVP QKFSM
101: FVSLCKRFKD RVLELEDPLR GVAPLLSAVR KVQVSSKRLT ALHPDCLQLC LLAKCYKAGF SILSDDILEV DQPRDFYLYC YYGGMICIGQ KKFQKALELL
201: YNVVTAPMHS VNAIALEAYK KYILVTLIHS GQFSVSLPKC ASTAAQRHLK TWSLPYTEVG NCYNEGKISE LQAVVVAHSS DFEKDNNLGL VKQAVSSLYK
301: RNILRLTQKY LTLSLQDIAN MVQLANAKEA EMHVLQMIQD GQIHALINQK DGMVRFLEDP EQYKTSEMIE VMDSVIQRTI GLSKNLIAMD ESLSCDPLYL
401: GKVGRERQRY DFGEDFDTVP QKFSM
001: MIGAVNSVEA VITSIQGLSG SPEDLSALHD LLRGAQDSLR AEPGVNFSTL DQLDASKHSL GYLYFLEVLT CGPVSKEKAA YEIPIIARFI NSCDAGQIRL
101: ASYKFVSLCK ILKDHVIALG DPLRGVGPLL NAVQKLQVSS KRLTALHPDV LQLCLQAKSY KSGFSILSDD IVEIDQPRDF FLYSYYGGMI CIGLKRFQKA
201: LELLYNVVTA PMHQVNAIAL EAYKKYILVS LIHNGQFTNT LPKCASTAAQ RSFKNYTGPY IELGNCYNDG KIGELEALVV ARNAEFEEDK NLGLVKQAVS
301: SLYKRNILRL TQKYLTLSLQ DIANMVQLGN AKEAEMHVLQ MIQDGQIHAL INQKDGMVRF LEDPEQYKSS EMIEIMDSVI QRTIGLSKNL LAMDESLSCD
401: PLYLGKVGRE RQRYDFGDDF DTVPQKFSM
101: ASYKFVSLCK ILKDHVIALG DPLRGVGPLL NAVQKLQVSS KRLTALHPDV LQLCLQAKSY KSGFSILSDD IVEIDQPRDF FLYSYYGGMI CIGLKRFQKA
201: LELLYNVVTA PMHQVNAIAL EAYKKYILVS LIHNGQFTNT LPKCASTAAQ RSFKNYTGPY IELGNCYNDG KIGELEALVV ARNAEFEEDK NLGLVKQAVS
301: SLYKRNILRL TQKYLTLSLQ DIANMVQLGN AKEAEMHVLQ MIQDGQIHAL INQKDGMVRF LEDPEQYKSS EMIEIMDSVI QRTIGLSKNL LAMDESLSCD
401: PLYLGKVGRE RQRYDFGDDF DTVPQKFSM
Arabidopsis Description
CSN3COP9 signalosome complex subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8W575]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.