CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG93168
KRG95386
KRG95660
KRH01660
KRH10268
KRH23061
KRH24799
KRH29804
KRH38098
KRH41795
KRH43389
KRH53856
KRH56507
KRH59535
KRH60498
KRH64098
KRH67068
KRH67374
KRH70465
KRH71847

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G09810.1	KRG95660	AT2G31200.1	21798944
AT5G09810.1	KRH67374	AT2G31200.1	21798944
AT5G09810.1	KRG93168	AT2G37620.1	21798944
AT5G09810.1	KRG95386	AT2G37620.1	21798944
AT5G09810.1	KRH01660	AT2G37620.1	21798944
AT5G09810.1	KRH10268	AT2G37620.1	21798944
AT5G09810.1	KRH23061	AT2G37620.1	21798944
AT5G09810.1	KRH24799	AT2G37620.1	21798944
AT5G09810.1	KRH29804	AT2G37620.1	21798944
AT5G09810.1	KRH38098	AT2G37620.1	21798944
AT5G09810.1	KRH56507	AT2G37620.1	21798944
AT5G09810.1	KRH67068	AT2G37620.1	21798944
AT5G09810.1	KRH70465	AT2G37620.1	21798944
AT5G09810.1	KRH71847	AT2G37620.1	21798944
AT5G09810.1	KRG93168	AT3G12110.1	21798944
AT5G09810.1	KRG95386	AT3G12110.1	21798944
AT5G09810.1	KRH01660	AT3G12110.1	21798944
AT5G09810.1	KRH10268	AT3G12110.1	21798944
AT5G09810.1	KRH23061	AT3G12110.1	21798944
AT5G09810.1	KRH24799	AT3G12110.1	21798944
AT5G09810.1	KRH29804	AT3G12110.1	21798944
AT5G09810.1	KRH38098	AT3G12110.1	21798944
AT5G09810.1	KRH56507	AT3G12110.1	21798944
AT5G09810.1	KRH67068	AT3G12110.1	21798944
AT5G09810.1	KRH70465	AT3G12110.1	21798944
AT5G09810.1	KRH71847	AT3G12110.1	21798944
AT5G09810.1	KRH41795	AT3G18060.1	21798944
AT5G09810.1	KRH60498	AT3G18060.1	21798944
AT5G09810.1	KRH43389	AT5G09810.1	21798944
AT5G09810.1	KRH53856	AT5G09810.1	21798944
AT5G09810.1	KRH59535	AT5G09810.1	21798944
AT5G09810.1	KRH64098	AT5G09810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53856	Soybean	endoplasmic reticulum, mitochondrion	88.06	100.0
KRH43389	Soybean	cytosol	99.47	99.47
KRH59535	Soybean	cytosol	99.47	99.47
PGSC0003DMT400047481	Potato	cytosol	98.94	98.94
Solyc03g078400.2.1	Tomato	nucleus, plastid	98.94	98.94
AT5G09810.1	Thale cress	cytosol	98.41	98.41
CDX69885	Canola	cytosol	98.41	98.41
CDY21607	Canola	cytosol	98.41	98.41
PGSC0003DMT400010174	Potato	cytosol	98.41	98.41
Solyc11g005330.1.1	Tomato	nucleus	98.41	98.41
CDX85794	Canola	cytosol	92.04	98.3
CDY30296	Canola	cytosol	92.04	98.3
CDY31972	Canola	cytosol	92.04	98.3
CDY40061	Canola	cytosol	92.04	98.3
Bra028615.1-P	Field mustard	cytosol	98.14	98.14
Bra009081.1-P	Field mustard	cytosol	91.78	98.02
CDX81140	Canola	cytosol	97.88	97.88
CDY56544	Canola	cytosol	97.88	97.88
Os05t0106600-01	Rice	nucleus	97.88	97.88
Bra006033.1-P	Field mustard	cytosol	97.61	97.61
HORVU5Hr1G117900.1	Barley	cytosol	97.61	97.61
KXG21029	Sorghum	cytosol	97.61	97.61
Os11t0163100-01	Rice	nucleus, plasma membrane, plastid	97.61	97.61
TraesCS5B01G124100.1	Wheat	cytosol	97.61	97.61
TraesCS5B01G516100.1	Wheat	cytosol	97.61	97.61
TraesCS5D01G516200.1	Wheat	cytosol	97.61	97.61
Zm00001d011086_P005	Maize	cytosol	97.61	97.61
Zm00001d035720_P002	Maize	cytosol	97.61	97.61
TraesCS1B01G024500.1	Wheat	golgi, nucleus	97.35	97.35
TraesCS1D01G020000.1	Wheat	cytosol	97.35	97.35
GSMUA_Achr9P03170_001	Banana	cytosol	97.08	97.34
TraesCS4A01G356100.2	Wheat	cytosol	97.61	97.1
EES08028	Sorghum	cytosol	97.08	97.08
GSMUA_Achr3P02960_001	Banana	cytosol	97.08	97.08
GSMUA_Achr6P25350_001	Banana	cytosol	97.08	97.08
GSMUA_Achr8P16150_001	Banana	cytosol	97.08	97.08
KRG95386	Soybean	cytosol	97.08	97.08
KXG23031	Sorghum	cytosol	97.08	97.08
GSMUA_Achr9P08850_001	Banana	cytosol	89.66	96.85
GSMUA_Achr5P29190_001	Banana	cytosol	89.39	96.84
GSMUA_Achr2P16160_001	Banana	cytosol	96.82	96.82
KRH10268	Soybean	mitochondrion, nucleus	96.82	96.82
KRH67068	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.82	96.82
Os01t0964133-01	Rice	plasma membrane	96.82	96.82
Zm00001d053177_P004	Maize	cytosol	96.82	96.82
GSMUA_Achr11P...	Banana	cytosol	89.39	96.56
GSMUA_Achr10P...	Banana	cytosol	96.55	96.55
KRH23061	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.55	96.55
Zm00001d019635_P001	Maize	cytosol	35.28	96.38
GSMUA_Achr6P34320_001	Banana	cytosol	62.33	96.31
GSMUA_Achr7P10410_001	Banana	cytosol	96.29	96.29
GSMUA_Achr8P02660_001	Banana	cytosol	96.29	96.29
KRH56507	Soybean	endoplasmic reticulum, mitochondrion	96.29	96.29
Os03t0836000-01	Rice	plasma membrane, plastid	96.29	96.29
KRG93168	Soybean	mitochondrion, nucleus	96.02	96.02
KRH01660	Soybean	mitochondrion, nucleus	96.02	96.02
KRH29804	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.02	96.02
KRH38098	Soybean	cytosol	96.02	96.02
EER90564	Sorghum	cytosol	95.76	95.76
KRH70465	Soybean	mitochondrion, nucleus	95.76	95.76
KRH71847	Soybean	endoplasmic reticulum, nucleus	95.76	95.76
Zm00001d035722_P007	Maize	plasma membrane	97.61	95.58
GSMUA_Achr11P...	Banana	cytosol	94.96	94.96
KRH10484	Soybean	endoplasmic reticulum, mitochondrion, nucleus	94.96	94.96
KRH43946	Soybean	endoplasmic reticulum, mitochondrion, nucleus	94.96	94.96
Zm00001d012277_P001	Maize	cytosol	93.9	94.15
TraesCS5D01G132200.1	Wheat	golgi	92.31	93.8
EES01810	Sorghum	cytosol	93.1	93.35
Os05t0438800-01	Rice	plasma membrane, plastid	92.84	93.09
Zm00001d042731_P002	Maize	extracellular, plasma membrane, plastid	92.57	92.82
HORVU1Hr1G074350.1	Barley	cytosol	92.31	92.55
TraesCS1A01G274400.1	Wheat	golgi	92.31	92.55
TraesCS1B01G283900.1	Wheat	cytosol	92.31	92.55
TraesCS1D01G274400.1	Wheat	cytosol	92.31	92.55
Zm00001d016605_P001	Maize	cytosol	38.73	92.41
EES19603	Sorghum	cytosol	92.04	92.29
Bra022356.1-P	Field mustard	cytosol	79.05	92.26
CDX99315	Canola	cytosol	79.05	92.26
Zm00001d034761_P002	Maize	cytosol	95.76	92.09
AT1G49240.1	Thale cress	cytosol	92.04	92.04
CDX82326	Canola	cytosol	92.04	92.04
Zm00001d010159_P002	Maize	extracellular, plasma membrane	91.78	92.02
AT3G18780.3	Thale cress	cytosol	91.78	91.78
CDX92272	Canola	cytosol	91.78	91.78
CDX95498	Canola	cytosol	91.78	91.78
CDY18545	Canola	cytosol	91.78	91.78
CDY61982	Canola	cytosol	91.51	91.51
CDX92271	Canola	cytosol	76.66	91.17
HORVU1Hr1G002840.6	Barley	plasma membrane	97.35	90.17
TraesCS1A01G020500.2	Wheat	cytosol	97.35	90.17
TraesCS5A01G124300.2	Wheat	golgi	97.61	89.98
Zm00001d016508_P001	Maize	cytosol	31.57	86.23
GSMUA_Achr10P...	Banana	cytosol	62.86	86.18
KXG21030	Sorghum	cytosol	88.33	85.6
KRH24799	Soybean	cytosol	92.04	84.63
Zm00001d008746_P001	Maize	cytosol	61.54	84.36
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	78.51	83.85
GSMUA_Achr2P08030_001	Banana	cytosol	77.19	83.14
Zm00001d019396_P001	Maize	cytosol	36.6	82.14
VIT_04s0044g00580.t01	Wine grape	extracellular	98.94	81.09
Zm00001d011087_P001	Maize	plastid	97.61	81.06
Zm00001d007792_P001	Maize	cytosol	55.17	78.79
Zm00001d003298_P001	Maize	cytosol	53.32	76.43
HORVU5Hr1G039850.3	Barley	mitochondrion	93.63	75.91
Zm00001d004087_P001	Maize	cytosol	41.38	72.22
Os01t0866100-01	Rice	plasma membrane	38.2	70.94
Zm00001d004855_P002	Maize	cytoskeleton, cytosol, nucleus	96.29	61.53
KRG94584	Soybean	cytosol	44.3	42.93
KRH06905	Soybean	cytosol	43.77	42.42
KRH39934	Soybean	cytosol	32.89	37.58
KRH13968	Soybean	cytosol, nucleus	35.81	37.4
Zm00001d034421_P004	Maize	plastid	46.15	37.18
KRH23861	Soybean	cytosol, nucleus	35.54	37.12
KRH32953	Soybean	cytosol	35.54	37.12
KRH66446	Soybean	nucleus	42.44	35.96
KRH41617	Soybean	nucleus	40.58	35.5
KRH48882	Soybean	nucleus	41.91	35.43
KRH59222	Soybean	cytosol	18.04	35.42
KRH59228	Soybean	nucleus	37.67	33.18
KRH61849	Soybean	cytosol, nucleus	33.69	29.13

Protein Annotations

EntrezGene:100789000	MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EMBL:ACUP02002737	InterPro:Actin
InterPro:Actin/actin-like_CS	InterPro:Actin_CS	EnsemblPlantsGene:GLYMA_04G215900	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	UniProt:I1JY56	EnsemblPlants:KRH64098	ProteinID:KRH64098	ProteinID:KRH64098.1	ProteinID:KRH64099.1
PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432	ScanProsite:PS01132	PANTHER:PTHR11937
PANTHER:PTHR11937:SF358	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI0002339975	:	:

Description

hypothetical protein

Coordinates

chr4:+:48716390..48719287

Molecular Weight (calculated)

41718.2 Da

IEP (calculated)

5.162

GRAVY (calculated)

-0.176

Length

377 amino acids

Sequence
(BLAST)

001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTSAEREI VRDMKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSMIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KGEYDESGPS IVHRKCF

Best Arabidopsis Sequence Match ( AT5G09810.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF

Arabidopsis Description

ACT7AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.