CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32953	Soybean	cytosol	95.84	95.84
KRH23861	Soybean	cytosol, nucleus	89.75	89.75
KRH39934	Soybean	cytosol	81.44	89.09
VIT_13s0064g00730.t01	Wine grape	cytosol	84.21	84.21
CDY56730	Canola	cytosol	80.06	80.28
AT3G60830.1	Thale cress	cytosol	80.33	79.89
Bra003429.1-P	Field mustard	cytosol	79.5	79.72
CDX67843	Canola	cytosol	79.22	79.44
PGSC0003DMT400019210	Potato	cytosol	77.56	77.78
CDX71774	Canola	cytosol	76.73	77.59
Solyc11g008500.1.1	Tomato	cytosol, nucleus	77.01	77.22
CDY62715	Canola	cytosol	77.01	76.58
VIT_00s0214g00170.t01	Wine grape	cytosol	36.84	76.0
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	59.28	73.54
EER91551	Sorghum	cytosol	71.19	71.39
Os03t0783000-01	Rice	cytosol, nucleus	70.64	70.83
TraesCS5D01G429200.1	Wheat	cytosol	70.36	70.17
TraesCS5A01G420600.1	Wheat	cytosol, nucleus	70.36	70.17
TraesCS5B01G422700.1	Wheat	cytosol	70.08	69.89
CDY52344	Canola	cytosol	77.84	69.73
Bra007566.1-P	Field mustard	cytosol	59.28	65.24
Zm00001d014112_P003	Maize	cytosol	70.91	61.99
HORVU5Hr1G102220.2	Barley	plastid	70.64	58.22
KRG93168	Soybean	mitochondrion, nucleus	38.78	37.14
KRH01660	Soybean	mitochondrion, nucleus	38.78	37.14
KRH70465	Soybean	mitochondrion, nucleus	38.78	37.14
KRH56507	Soybean	endoplasmic reticulum, mitochondrion	38.5	36.87
KRH53856	Soybean	endoplasmic reticulum, mitochondrion	33.8	36.75
KRH29804	Soybean	endoplasmic reticulum, mitochondrion, nucleus	38.23	36.6
KRH10268	Soybean	mitochondrion, nucleus	37.95	36.34
KRH10484	Soybean	endoplasmic reticulum, mitochondrion, nucleus	37.95	36.34
KRH23061	Soybean	endoplasmic reticulum, mitochondrion, nucleus	37.95	36.34
KRH38098	Soybean	cytosol	37.67	36.07
KRG95386	Soybean	cytosol	37.67	36.07
KRH71847	Soybean	endoplasmic reticulum, nucleus	37.67	36.07
KRH43946	Soybean	endoplasmic reticulum, mitochondrion, nucleus	37.67	36.07
KRH64098	Soybean	cytosol	37.4	35.81
KRH67068	Soybean	endoplasmic reticulum, mitochondrion, nucleus	37.4	35.81
KRH59535	Soybean	cytosol	37.4	35.81
KRH43389	Soybean	cytosol	37.4	35.81
KRH24799	Soybean	cytosol	34.9	30.73
KRH06905	Soybean	cytosol	28.25	26.22
KRG94584	Soybean	cytosol	27.98	25.96
KRH66446	Soybean	nucleus	28.25	22.92
KRH41617	Soybean	nucleus	27.15	22.74
KRH59222	Soybean	cytosol	11.91	22.4
KRH48882	Soybean	nucleus	27.42	22.2
KRH59228	Soybean	nucleus	26.32	22.2
KRH61849	Soybean	cytosol, nucleus	25.21	20.87

Protein Annotations

EntrezGene:100794153	MapMan:12.4.2.4	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EMBL:ACUP02009806	InterPro:Actin
InterPro:Arp7_plant	EnsemblPlantsGene:GLYMA_15G275500	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006325	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0032502	UniProt:I1MJQ3
EnsemblPlants:KRH13968	ProteinID:KRH13968	ProteinID:KRH13968.1	PFAM:PF00022	PRINTS:PR00190	PANTHER:PTHR11937
PANTHER:PTHR11937:SF257	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000233C152	:	:

Description

hypothetical protein

Coordinates

chr15:-:51432802..51446800

Molecular Weight (calculated)

39550.2 Da

IEP (calculated)

4.572

GRAVY (calculated)

-0.111

Length

361 amino acids

Sequence
(BLAST)

001: MEAAVVDPGS SLLKAGFAIP DQAPAMIIPT QMKRMLDDGS MTDNLTFDDI AVDPVCRGYV RDWDALEDLL HYVLYTGLGW EMGNEGQILF TDPLCTPKAN
101: KEQLVQLMFE TFNISGFYAS EQAVLSLYAV GRISGCTVDI GHGKIDIAPV IEGAVNHIAS RRFEFGGVDL TNFLAQELGK SNPLVNISIS DVEKIKQQYS
201: CCAEDELAYQ KTKGSCPVET HTLPDGQVIT IGRERYTVGE ALFQPCLLGL EAHGIVEQLV RTISTVSSDN HRQLLENTVV CGGTSSMTGF EERFQKESSQ
301: SSSAIRPTLV KPPEYMPENL TMNSAWVGGA ILAKVVFPQN QHVTKADYDE TGPSIVHRKC F

Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)

001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF

Arabidopsis Description

ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.