CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23861	Soybean	cytosol, nucleus	98.18	89.75
KRH13968	Soybean	cytosol, nucleus	89.09	81.44
KRH32953	Soybean	cytosol	88.18	80.61
VIT_13s0064g00730.t01	Wine grape	cytosol	83.94	76.73
CDY56730	Canola	cytosol	79.09	72.5
CDX67843	Canola	cytosol	78.79	72.22
AT3G60830.1	Thale cress	cytosol	79.39	72.18
Bra003429.1-P	Field mustard	cytosol	78.48	71.94
PGSC0003DMT400019210	Potato	cytosol	78.18	71.67
Solyc11g008500.1.1	Tomato	cytosol, nucleus	77.58	71.11
CDX71774	Canola	cytosol	76.36	70.59
CDY62715	Canola	cytosol	76.67	69.7
EER91551	Sorghum	cytosol	70.91	65.0
Os03t0783000-01	Rice	cytosol, nucleus	70.3	64.44
CDY52344	Canola	cytosol	77.27	63.28
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	55.76	63.23
TraesCS5A01G420600.1	Wheat	cytosol, nucleus	68.79	62.71
TraesCS5D01G429200.1	Wheat	cytosol	68.79	62.71
TraesCS5B01G422700.1	Wheat	cytosol	68.48	62.43
VIT_00s0214g00170.t01	Wine grape	cytosol	32.42	61.14
Bra007566.1-P	Field mustard	cytosol	57.88	58.23
Zm00001d014112_P003	Maize	cytosol	70.0	55.93
HORVU5Hr1G102220.2	Barley	plastid	68.48	51.6
KRH53856	Soybean	endoplasmic reticulum, mitochondrion	34.55	34.34
KRH01660	Soybean	mitochondrion, nucleus	38.79	33.95
KRH70465	Soybean	mitochondrion, nucleus	38.79	33.95
KRG93168	Soybean	mitochondrion, nucleus	38.48	33.69
KRH56507	Soybean	endoplasmic reticulum, mitochondrion	38.48	33.69
KRH29804	Soybean	endoplasmic reticulum, mitochondrion, nucleus	38.48	33.69
KRH10268	Soybean	mitochondrion, nucleus	38.18	33.42
KRH10484	Soybean	endoplasmic reticulum, mitochondrion, nucleus	38.18	33.42
KRH23061	Soybean	endoplasmic reticulum, mitochondrion, nucleus	38.18	33.42
KRH38098	Soybean	cytosol	37.88	33.16
KRG95386	Soybean	cytosol	37.88	33.16
KRH43946	Soybean	endoplasmic reticulum, mitochondrion, nucleus	37.88	33.16
KRH71847	Soybean	endoplasmic reticulum, nucleus	37.88	33.16
KRH64098	Soybean	cytosol	37.58	32.89
KRH67068	Soybean	endoplasmic reticulum, mitochondrion, nucleus	37.58	32.89
KRH59535	Soybean	cytosol	37.58	32.89
KRH43389	Soybean	cytosol	37.58	32.89
KRH24799	Soybean	cytosol	34.55	27.8
KRH06905	Soybean	cytosol	29.09	24.68
KRG94584	Soybean	cytosol	28.79	24.42
KRH59222	Soybean	cytosol	12.42	21.35
KRH66446	Soybean	nucleus	27.58	20.45
KRH41617	Soybean	nucleus	26.67	20.42
KRH59228	Soybean	nucleus	26.36	20.33
KRH48882	Soybean	nucleus	26.67	19.73
KRH61849	Soybean	cytosol, nucleus	23.33	17.66

Protein Annotations

EntrezGene:100814978	Gene3D:3.30.420.40	Gene3D:3.90.640.10	MapMan:35.1	EMBL:ACUP02006013	InterPro:Actin
InterPro:Arp7_plant	EnsemblPlantsGene:GLYMA_09G229000	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006325	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0032502	UniProt:I1L5N3
EnsemblPlants:KRH39934	ProteinID:KRH39934	ProteinID:KRH39934.1	PFAM:PF00022	PRINTS:PR00190	PANTHER:PTHR11937
PANTHER:PTHR11937:SF257	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI0002338312	:	:

Description

hypothetical protein

Coordinates

chr9:+:45307452..45311230

Molecular Weight (calculated)

36115.1 Da

IEP (calculated)

4.479

GRAVY (calculated)

-0.084

Length

330 amino acids

Sequence
(BLAST)

001: MEAAVVDVGS KLLKADFAIP DQTPAMIIPT QMKQLLDDGS VTDSSLADNV TVDPVVRGFI RDWDAIEDLL HHVLYTGLGW EIGNEGQILF TDPLCTPKAN
101: KEQLVQLMFE TFNISGFYAS EQAVLSLYAV GRISGCTVDI GHGKIELGKS NPQVNISMSD VEKIKELYSC CAEDELAYQK TGYSCPVEKH TLPDGQVITI
201: GRERYTVGEA LFQPCLLGLE AHGIVDQLVR AISTVSSDNQ RQLLENTVVC GGTSSMAGFE ERFQKESSLS SSAVQPTLVK PPEYMPENLT MYSAWVGGAI
301: LAKVVFPQNQ HITKADYDET GPSIVHRKCF

Best Arabidopsis Sequence Match ( AT1G49240.1 )
(BLAST)

001: MADADDIQPI VCDNGTGMVK AGFAGDDAPR AVFPSVVGRP RHHGVMVGMN QKDAYVGDEA QSKRGILTLK YPIEHGVVSN WDDMEKIWHH TFYNELRIAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN SPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG FSLPHAILRL DLAGRDLTDY LMKILTERGY
201: MFTTTAEREI VRDIKEKLSF VAVDYEQEME TSKTSSSIEK NYELPDGQVI TIGAERFRCP EVLFQPSFVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFSG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KAEYDEAGPG IVHRKCF

Arabidopsis Description

ACT8Actin-8 [Source:UniProtKB/Swiss-Prot;Acc:Q96293]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.