Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56730 Canola cytosol 92.29 93.06
CDX67843 Canola cytosol 91.46 92.22
AT3G60830.1 Thale cress cytosol 90.91 90.91
CDX71774 Canola cytosol 88.71 90.2
CDY52344 Canola cytosol 90.08 81.14
VIT_13s0064g00730.t01 Wine grape cytosol 80.44 80.89
PGSC0003DMT400019210 Potato cytosol 76.86 77.5
Solyc11g008500.1.1 Tomato cytosol, nucleus 76.86 77.5
KRH32953 Soybean cytosol 76.86 77.29
KRH13968 Soybean cytosol, nucleus 76.58 77.01
KRH23861 Soybean cytosol, nucleus 76.58 77.01
KRH39934 Soybean cytosol 69.7 76.67
GSMUA_AchrUn_... Banana endoplasmic reticulum 59.78 74.57
EER91551 Sorghum cytosol 72.45 73.06
Os03t0783000-01 Rice cytosol, nucleus 72.18 72.78
TraesCS5D01G429200.1 Wheat cytosol 72.45 72.65
TraesCS5A01G420600.1 Wheat cytosol, nucleus 72.18 72.38
TraesCS5B01G422700.1 Wheat cytosol 72.18 72.38
VIT_00s0214g00170.t01 Wine grape cytosol 33.88 70.29
Zm00001d014112_P003 Maize cytosol 71.9 63.2
HORVU5Hr1G102220.2 Barley plastid 71.9 59.59
CDY65255 Canola cytosol 36.36 39.88
CDX93360 Canola cytosol 36.09 39.58
CDX99315 Canola cytosol 34.71 39.01
CDY07779 Canola cytosol 37.74 38.92
CDX73527 Canola cytosol 37.74 38.81
CDX85794 Canola cytosol 37.74 38.81
CDY40061 Canola cytosol 37.74 38.81
CDY31972 Canola cytosol 37.47 38.53
CDY30296 Canola cytosol 37.47 38.53
CDY48688 Canola cytosol 35.81 38.24
CDY01102 Canola cytosol 39.39 37.93
CDY30846 Canola cytosol 39.12 37.67
CDX76191 Canola cytosol 39.12 37.67
CDX78202 Canola cytosol 39.12 37.67
CDY38066 Canola cytosol 39.12 37.67
CDY21777 Canola cytosol 39.12 37.67
CDY21607 Canola cytosol 39.12 37.67
CDX71119 Canola cytosol 39.12 37.67
CDY53444 Canola cytosol 39.12 37.67
CDX82985 Canola cytosol 39.12 37.67
CDY08455 Canola cytosol 39.12 37.67
CDX69885 Canola cytosol 39.12 37.67
CDX99111 Canola cytosol 39.12 37.67
CDX86081 Canola cytosol 39.12 37.67
CDX88698 Canola cytosol 39.12 37.67
CDY56544 Canola cytosol 38.84 37.4
CDX81140 Canola cytosol 38.84 37.4
CDX74944 Canola cytosol 38.84 37.4
CDX91373 Canola cytosol 38.84 37.4
CDX87810 Canola cytosol 38.57 37.14
CDX79746 Canola cytosol 37.74 36.83
CDY61982 Canola cytosol 38.02 36.6
CDX92272 Canola cytosol 38.02 36.6
CDX95498 Canola cytosol 38.02 36.6
CDY18545 Canola cytosol 38.02 36.6
CDX82326 Canola cytosol 37.74 36.34
CDX94448 Canola cytosol 38.29 35.92
CDX92271 Canola cytosol 30.03 34.38
CDY14813 Canola cytosol 31.96 33.05
CDY71336 Canola cytosol 24.24 32.0
CDY06885 Canola cytosol 28.65 31.42
CDX67573 Canola cytosol 22.86 27.3
CDY20066 Canola cytosol 26.45 24.68
CDY00172 Canola cytosol 26.45 24.68
CDY52404 Canola cytosol 26.72 24.56
CDY13674 Canola cytosol 26.72 24.56
CDY34585 Canola cytosol 27.27 23.18
CDY21087 Canola cytosol 27.27 23.18
CDX83847 Canola cytosol 27.82 23.01
CDX98005 Canola cytosol 26.72 22.72
CDY26159 Canola cytosol 27.55 22.62
CDY19213 Canola cytosol 27.55 22.62
CDX96721 Canola cytosol 27.27 22.6
CDY19392 Canola cytosol 26.17 22.25
CDY42404 Canola cytosol 25.9 22.01
CDY33033 Canola nucleus 32.23 21.63
CDX80274 Canola nucleus 31.68 20.95
Protein Annotations
MapMan:12.4.2.4Gene3D:3.30.420.40Gene3D:3.90.640.10GO:A0A078JD08UniProt:A0A078JD08InterPro:Actin
InterPro:Arp7_plantEnsemblPlants:CDY62715ProteinID:CDY62715ProteinID:CDY62715.1GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006325GO:GO:0008150GO:GO:0009987GO:GO:0016043
GO:GO:0032502EnsemblPlantsGene:GSBRNA2T00037515001PFAM:PF00022PRINTS:PR00190PANTHER:PTHR11937PANTHER:PTHR11937:SF257
SMART:SM00268SUPFAM:SSF53067UniParc:UPI0004EF275F:::
Description
BnaC04g55390DBnaC04g55390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JD08]
Coordinates
chrLK034181:-:7173..9076
Molecular Weight (calculated)
39623.4 Da
IEP (calculated)
4.363
GRAVY (calculated)
-0.046
Length
363 amino acids
Sequence
(BLAST)
001: MEALVVDAGS KLLKAGAAIP DQSPPMLIPS QMKRMVDNGD VSSSAVTVLE DVTLLDPIER GFIRDWDAME DLLSYVVYPG LGWEEGNEGN ILFTDPLYTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YGAGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TDLTKLFAQE LGKSNPLVNL SMSDVETLKE
201: QYASCAEDEI AYEKTQNCEI ELHTLPDGQV ISIGRERFSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHTQLLENT VLCGGTTSMT GFEGRFQKEA
301: NLCSSAIRPM LVKPPEYMPE SLGLYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF
Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)
001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF
Arabidopsis Description
ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.