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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33033 Canola nucleus 95.99 97.41
CDY48688 Canola cytosol 54.83 88.53
GSMUA_Achr10P... Banana cytosol 38.98 81.37
CDY21777 Canola cytosol 55.19 80.37
CDX71119 Canola cytosol 55.19 80.37
CDX88698 Canola cytosol 55.19 80.37
CDX86081 Canola cytosol 55.19 80.37
CDX99111 Canola cytosol 55.19 80.37
CDY38066 Canola cytosol 55.01 80.11
CDX82985 Canola cytosol 55.01 80.11
AT5G59370.2 Thale cress cytosol 54.83 79.84
CDY53444 Canola cytosol 54.83 79.84
GSMUA_Achr7P18630_001 Banana cytosol 45.54 78.12
VIT_13s0019g01240.t01 Wine grape cytosol 53.55 77.98
KRH10268 Soybean mitochondrion, nucleus 53.55 77.98
KRH38098 Soybean cytosol 53.37 77.72
CDX74944 Canola cytosol 53.37 77.72
CDX91373 Canola cytosol 53.37 77.72
CDX73527 Canola cytosol 49.91 77.62
CDX78202 Canola cytosol 53.19 77.45
KRH23061 Soybean endoplasmic reticulum, mitochondrion, nucleus 53.19 77.45
KRH71847 Soybean endoplasmic reticulum, nucleus 53.19 77.45
KRH01660 Soybean mitochondrion, nucleus 53.01 77.19
KRG95386 Soybean cytosol 53.01 77.19
VIT_08s0007g06520.t01 Wine grape cytosol 53.01 77.19
KRH29804 Soybean endoplasmic reticulum, mitochondrion, nucleus 53.01 77.19
KRH70465 Soybean mitochondrion, nucleus 53.01 77.19
CDX76191 Canola cytosol 53.01 77.19
KRH67068 Soybean endoplasmic reticulum, mitochondrion, nucleus 53.01 77.19
VIT_06s0004g04570.t01 Wine grape cytosol 52.82 77.13
KRG93168 Soybean mitochondrion, nucleus 52.82 76.92
CDY30846 Canola cytosol 52.82 76.92
KRH56507 Soybean endoplasmic reticulum, mitochondrion 52.82 76.92
CDX99315 Canola cytosol 45.17 76.78
CDY07779 Canola cytosol 49.18 76.7
CDY08455 Canola cytosol 52.64 76.66
CDY01102 Canola cytosol 52.64 76.66
GSMUA_AchrUn_... Banana plasma membrane 52.64 76.66
CDY65255 Canola cytosol 46.08 76.44
CDX93360 Canola cytosol 45.9 76.13
CDY40061 Canola cytosol 48.63 75.64
CDY31972 Canola cytosol 48.63 75.64
CDX85794 Canola cytosol 48.63 75.64
CDY30296 Canola cytosol 48.63 75.64
CDY21607 Canola cytosol 51.91 75.6
CDX69885 Canola cytosol 51.91 75.6
CDY56544 Canola cytosol 51.73 75.33
CDX81140 Canola cytosol 51.73 75.33
Solyc10g086460.1.1 Tomato unclear 51.73 75.33
PGSC0003DMT400049429 Potato cytosol 51.55 75.07
PGSC0003DMT400023026 Potato cytosol 51.18 74.54
CDX94448 Canola cytosol 51.73 73.39
CDX87810 Canola cytosol 50.09 72.94
CDY18545 Canola cytosol 49.91 72.68
CDX92272 Canola cytosol 49.91 72.68
CDY61982 Canola cytosol 49.91 72.68
CDX95498 Canola cytosol 49.91 72.68
CDX79746 Canola cytosol 49.18 72.58
CDX82326 Canola cytosol 49.73 72.41
Solyc09g010750.1.1 Tomato cytosol 23.5 72.07
CDX92271 Canola cytosol 39.89 69.09
KRH24799 Soybean cytosol 50.46 67.56
CDY71336 Canola cytosol 32.79 65.45
CDX67573 Canola cytosol 34.61 62.5
CDY14813 Canola cytosol 36.07 56.41
CDY06885 Canola cytosol 32.97 54.68
Bra002571.1-P Field mustard nucleus 56.1 50.91
CDY00172 Canola cytosol 24.23 34.19
CDY20066 Canola cytosol 24.23 34.19
CDY13674 Canola cytosol 24.41 33.92
CDY52404 Canola cytosol 24.41 33.92
CDY62715 Canola cytosol 20.95 31.68
CDY56730 Canola cytosol 20.77 31.67
CDX67843 Canola cytosol 20.77 31.67
CDX71774 Canola cytosol 20.22 31.09
CDY26159 Canola cytosol 24.77 30.77
CDY19213 Canola cytosol 24.77 30.77
CDX83847 Canola cytosol 24.59 30.75
CDX96721 Canola cytosol 24.41 30.59
CDY52344 Canola cytosol 21.13 28.78
CDY21087 Canola cytosol 20.77 26.7
CDX98005 Canola cytosol 20.58 26.46
CDY34585 Canola cytosol 20.58 26.46
CDY19392 Canola cytosol 20.4 26.23
CDY42404 Canola cytosol 16.94 21.78
Protein Annotations
MapMan:12.5.4.2MapMan:20.2.1Gene3D:3.30.420.40Gene3D:3.30.890.10Gene3D:3.90.640.10GO:A0A078CW57
InterPro:ActinInterPro:Actin/actin-like_CSInterPro:Actin_CSEnsemblPlants:CDX80274ProteinID:CDX80274ProteinID:CDX80274.1
InterPro:DNA-bd_dom_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634EnsemblPlantsGene:GSBRNA2T00133257001InterPro:IPR001739InterPro:Methyl_CpG_DNA-bd
PFAM:PF00022PFAM:PF01429PRINTS:PR00190ScanProsite:PS00432ScanProsite:PS01132PFscan:PS50982
PANTHER:PTHR11937PANTHER:PTHR11937:SF276SMART:SM00268SUPFAM:SSF53067SUPFAM:SSF54171UniParc:UPI0004EEE08C
SEG:seg:::::
Description
BnaC09g34680D
Coordinates
chrLK031820:-:1019134..1027357
Molecular Weight (calculated)
60830.1 Da
IEP (calculated)
9.443
GRAVY (calculated)
-0.655
Length
549 amino acids
Sequence
(BLAST)
001: MANGEDIQPL VCDNGTRMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKREHPVLL TEAPLNPKAN REKMTQIMFE TFNTPAMYVA
101: IQTVLSLYAS GRTTGIVLAS GDGVSHTVPI YEERGYSFTT TAEREIVRDM KEKLSYIALD YEQELETSNT SSSVEKSFEL PDGQVITIGA ERFRCPEVLF
201: QPSMIGMENP GIHETTYNSI MKCDVDIRKD LYGKIVLSGG TTMFGGIGDR MSKEITALAP SSMKIKVVAP PERKYSVWIG GSILASLGTF QQMWIAKAEY
301: DESGPSIVHR KCLPKTELKP VGNRKNQTTI LKHHKDPSSK SLPTKSANLI GDEQESLIQG RKRRSNWLRG SESVRIGMSN GTEQTRKRAA PGDSNWLPPG
401: WRVEDKVRTS GATAGSVDKY YYEPITGRKF RSRTEVLYYL EHGTSKKGSK KPDNTDSTSD HVEGQGSNKS SRKAKEPTPP PRPRSPPLKF DFENPPEKVS
501: WSSANAGEEQ GWTPFVGDDK VQDSLRREWC TAFTVITTKN PTKLSSLRR
Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.