CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92272	Canola	cytosol	100.0	100.0
CDY18545	Canola	cytosol	100.0	100.0
CDX82326	Canola	cytosol	99.73	99.73
CDY61982	Canola	cytosol	99.73	99.73
CDX99315	Canola	cytosol	85.15	99.38
CDX92271	Canola	cytosol	83.29	99.05
KRH53856	Soybean	endoplasmic reticulum, mitochondrion	81.17	92.17
CDX85794	Canola	cytosol	85.94	91.78
CDY40061	Canola	cytosol	85.94	91.78
CDY01102	Canola	cytosol	91.78	91.78
EES08028	Sorghum	cytosol	91.78	91.78
GSMUA_Achr7P10410_001	Banana	cytosol	91.78	91.78
KRH64098	Soybean	cytosol	91.78	91.78
PGSC0003DMT400010174	Potato	cytosol	91.78	91.78
PGSC0003DMT400047481	Potato	cytosol	91.78	91.78
Solyc03g078400.2.1	Tomato	nucleus, plastid	91.78	91.78
Solyc11g005330.1.1	Tomato	nucleus	91.78	91.78
GSMUA_Achr9P03170_001	Banana	cytosol	91.51	91.76
CDX69885	Canola	cytosol	91.51	91.51
CDX81140	Canola	cytosol	91.51	91.51
CDX87810	Canola	cytosol	91.51	91.51
CDY08455	Canola	cytosol	91.51	91.51
CDY21607	Canola	cytosol	91.51	91.51
CDY56544	Canola	cytosol	91.51	91.51
GSMUA_Achr6P25350_001	Banana	cytosol	91.51	91.51
HORVU5Hr1G117900.1	Barley	cytosol	91.51	91.51
KRH43389	Soybean	cytosol	91.51	91.51
KRH59535	Soybean	cytosol	91.51	91.51
Os05t0106600-01	Rice	nucleus	91.51	91.51
TraesCS5B01G124100.1	Wheat	cytosol	91.51	91.51
TraesCS5B01G516100.1	Wheat	cytosol	91.51	91.51
TraesCS5D01G516200.1	Wheat	cytosol	91.51	91.51
Zm00001d053177_P004	Maize	cytosol	91.51	91.51
GSMUA_Achr9P08850_001	Banana	cytosol	84.62	91.4
GSMUA_Achr2P16160_001	Banana	cytosol	91.25	91.25
KXG23031	Sorghum	cytosol	91.25	91.25
Os11t0163100-01	Rice	nucleus, plasma membrane, plastid	91.25	91.25
CDY30296	Canola	cytosol	85.41	91.22
CDY31972	Canola	cytosol	85.41	91.22
GSMUA_Achr5P29190_001	Banana	cytosol	84.08	91.09
TraesCS4A01G356100.2	Wheat	cytosol	91.51	91.03
GSMUA_Achr6P34320_001	Banana	cytosol	58.89	90.98
EER90564	Sorghum	cytosol	90.98	90.98
GSMUA_Achr10P...	Banana	cytosol	90.98	90.98
GSMUA_Achr8P02660_001	Banana	cytosol	90.98	90.98
Os01t0964133-01	Rice	plasma membrane	90.98	90.98
TraesCS1B01G024500.1	Wheat	golgi, nucleus	90.98	90.98
TraesCS1D01G020000.1	Wheat	cytosol	90.98	90.98
CDX71119	Canola	cytosol	90.72	90.72
CDX82985	Canola	cytosol	90.72	90.72
CDX86081	Canola	cytosol	90.72	90.72
CDX88698	Canola	cytosol	90.72	90.72
CDX99111	Canola	cytosol	90.72	90.72
CDY30846	Canola	cytosol	90.72	90.72
GSMUA_Achr11P...	Banana	cytosol	90.72	90.72
GSMUA_Achr3P02960_001	Banana	cytosol	90.72	90.72
GSMUA_Achr8P16150_001	Banana	cytosol	90.72	90.72
KXG21029	Sorghum	cytosol	90.72	90.72
Zm00001d011086_P005	Maize	cytosol	90.72	90.72
Zm00001d035720_P002	Maize	cytosol	90.72	90.72
Zm00001d019635_P001	Maize	cytosol	33.16	90.58
GSMUA_Achr11P...	Banana	cytosol	83.82	90.54
CDX76191	Canola	cytosol	90.45	90.45
CDY21777	Canola	cytosol	90.45	90.45
CDY38066	Canola	cytosol	90.45	90.45
CDY53444	Canola	cytosol	90.45	90.45
Os03t0836000-01	Rice	plasma membrane, plastid	90.45	90.45
Zm00001d012277_P001	Maize	cytosol	90.19	90.43
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	84.62	90.37
CDY48688	Canola	cytosol	81.43	90.29
CDX74944	Canola	cytosol	90.19	90.19
CDX78202	Canola	cytosol	90.19	90.19
CDX91373	Canola	cytosol	90.19	90.19
EES01810	Sorghum	cytosol	89.66	89.89
CDX73527	Canola	cytosol	84.08	89.8
CDY07779	Canola	cytosol	83.55	89.49
CDX93360	Canola	cytosol	78.25	89.12
Zm00001d042731_P002	Maize	extracellular, plasma membrane, plastid	88.86	89.1
TraesCS5D01G132200.1	Wheat	golgi	87.53	88.95
Zm00001d035722_P007	Maize	plasma membrane	90.72	88.83
HORVU1Hr1G074350.1	Barley	cytosol	88.59	88.83
Os05t0438800-01	Rice	plasma membrane, plastid	88.59	88.83
TraesCS1A01G274400.1	Wheat	golgi	88.59	88.83
TraesCS1B01G283900.1	Wheat	cytosol	88.59	88.83
TraesCS1D01G274400.1	Wheat	cytosol	88.59	88.83
CDY65255	Canola	cytosol	77.98	88.82
EES19603	Sorghum	cytosol	88.06	88.3
Zm00001d010159_P002	Maize	extracellular, plasma membrane	87.27	87.5
Zm00001d034761_P002	Maize	cytosol	90.98	87.5
Zm00001d016605_P001	Maize	cytosol	36.6	87.34
CDX94448	Canola	cytosol	87.53	85.27
CDX79746	Canola	cytosol	83.55	84.68
TraesCS5A01G124300.2	Wheat	golgi	91.51	84.35
HORVU1Hr1G002840.6	Barley	plasma membrane	90.98	84.28
TraesCS1A01G020500.2	Wheat	cytosol	90.98	84.28
Zm00001d016508_P001	Maize	cytosol	30.24	82.61
GSMUA_Achr10P...	Banana	cytosol	60.21	82.55
Zm00001d008746_P001	Maize	cytosol	59.42	81.45
KXG21030	Sorghum	cytosol	81.96	79.43
GSMUA_Achr2P08030_001	Banana	cytosol	73.74	79.43
Zm00001d019396_P001	Maize	cytosol	35.28	79.17
Zm00001d007792_P001	Maize	cytosol	52.79	75.38
Zm00001d011087_P001	Maize	plastid	90.72	75.33
VIT_04s0044g00580.t01	Wine grape	extracellular	91.78	75.22
CDY71336	Canola	cytosol	53.32	73.09
Zm00001d003298_P001	Maize	cytosol	50.13	71.86
HORVU5Hr1G039850.3	Barley	mitochondrion	88.33	71.61
CDY14813	Canola	cytosol	65.78	70.66
Zm00001d004087_P001	Maize	cytosol	40.05	69.91
CDY06885	Canola	cytosol	60.48	68.88
Os01t0866100-01	Rice	plasma membrane	36.87	68.47
CDX67573	Canola	cytosol	52.25	64.8
Zm00001d004855_P002	Maize	cytoskeleton, cytosol, nucleus	90.72	57.97
CDY33033	Canola	nucleus	73.74	51.39
CDX80274	Canola	nucleus	72.68	49.91
CDY00172	Canola	cytosol	44.3	42.93
CDY20066	Canola	cytosol	44.3	42.93
CDY13674	Canola	cytosol	44.56	42.53
CDY52404	Canola	cytosol	44.56	42.53
CDY62715	Canola	cytosol	36.6	38.02
CDX67843	Canola	cytosol	36.07	37.78
CDY56730	Canola	cytosol	36.07	37.78
CDX71774	Canola	cytosol	35.54	37.53
CDX96721	Canola	cytosol	42.71	36.76
CDX83847	Canola	cytosol	42.71	36.67
CDY19213	Canola	cytosol	42.97	36.65
CDY26159	Canola	cytosol	42.97	36.65
Zm00001d034421_P004	Maize	plastid	44.3	35.68
CDY52344	Canola	cytosol	36.34	33.99
CDY21087	Canola	cytosol	36.6	32.32
CDX98005	Canola	cytosol	36.07	31.85
CDY34585	Canola	cytosol	36.07	31.85
CDY19392	Canola	cytosol	35.81	31.62
CDY42404	Canola	cytosol	31.3	27.63

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS
unigene:Bna.111	EnsemblPlants:CDX95498	ProteinID:CDX95498	ProteinID:CDX95498.1	ProteinID:CDY18545.1	GO:D8L1W0
UniProt:D8L1W0	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:GSBRNA2T00101303001
PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432	ScanProsite:PS01132	PANTHER:PTHR11937
PANTHER:PTHR11937:SF276	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI00001253E6	:	:

Description

BnaC01g33900DActin2.2 [Source:UniProtKB/TrEMBL;Acc:D8L1W0]

Coordinates

chrLK031889:-:705301..707560

Molecular Weight (calculated)

41879.3 Da

IEP (calculated)

5.289

GRAVY (calculated)

-0.181

Length

377 amino acids

Sequence
(BLAST)

001: MAEADDIQPI VCDNGTGMVK AGFAGDDAPR AVFPSVVGRP RHHGVMVGMN QKDAYVGDEA QSKRGILTLK YPIEHGVVSN WDDMEKIWHH TFYNELRIAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN SPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG FSLPHAILRL DLAGRDLTDY LMKILTERGY
201: MFTTTAEREI VRDIKEKLSF VAVDYEQEME TSKTSSSIEK NYELPDGQVI TIGAERFRCP EVLFQPSFVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFSG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KAEYDEAGPG IVHRKCF

Best Arabidopsis Sequence Match ( AT3G18780.3 )
(BLAST)

Arabidopsis Description

ACT2Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q96292]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.