Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003298_P001
Zm00001d004087_P001
Zm00001d004855_P002
Zm00001d007792_P001
Zm00001d008517_P001
Zm00001d008746_P001
Zm00001d008768_P001
Zm00001d009747_P001
Zm00001d010159_P002
Zm00001d011086_P005
Zm00001d011087_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d012277_P001
Zm00001d013141_P001
Zm00001d014053_P001
Zm00001d016508_P001
Zm00001d016605_P001
Zm00001d019396_P001
Zm00001d019635_P001
Zm00001d029295_P001
Zm00001d029656_P003
Zm00001d034024_P001
Zm00001d034326_P001
Zm00001d034421_P004
Zm00001d034761_P002
Zm00001d035720_P002
Zm00001d035722_P007
Zm00001d038078_P001
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d040038_P001
Zm00001d042097_P001
Zm00001d042731_P002
Zm00001d044301_P001
Zm00001d047714_P001
Zm00001d053177_P004

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 Zm00001d009747_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011131_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011132_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011202_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d038846_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d039163_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d044301_P001 AT1G72770.1 19033529
AT5G09810.1 Zm00001d013141_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d029656_P003 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034024_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034326_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d008517_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d008768_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d014053_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d029295_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d038078_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d040038_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d042097_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d047714_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d003298_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004855_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d007792_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d008746_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d010159_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011086_P005 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d012277_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016508_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016605_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019396_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019635_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034421_P004 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034761_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035720_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035722_P007 AT5G09810.1 21798944
AT5G09810.1 Zm00001d042731_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d053177_P004 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400076499 Potato cytosol 53.79 73.58
Zm00001d019635_P001 Maize cytosol 35.98 68.84
Zm00001d016605_P001 Maize cytosol 39.02 65.19
Zm00001d004087_P001 Maize cytosol 53.03 64.81
Zm00001d016508_P001 Maize cytosol 32.58 62.32
Zm00001d019396_P001 Maize cytosol 39.39 61.9
KRH53856 Soybean endoplasmic reticulum, mitochondrion 74.24 59.04
Zm00001d012277_P001 Maize cytosol 83.71 58.78
Zm00001d003298_P001 Maize cytosol 58.33 58.56
GSMUA_Achr5P29190_001 Banana cytosol 76.89 58.33
CDX92271 Canola cytosol 69.7 58.04
EES01810 Sorghum cytosol 82.58 57.98
GSMUA_Achr9P08850_001 Banana cytosol 76.52 57.88
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 82.2 57.71
GSMUA_Achr11P... Banana cytosol 75.76 57.31
GSMUA_Achr9P03170_001 Banana cytosol 80.3 56.38
Zm00001d010159_P002 Maize extracellular, plasma membrane 80.3 56.38
GSMUA_Achr8P16150_001 Banana cytosol 79.92 55.97
Zm00001d035720_P002 Maize cytosol 79.92 55.97
Zm00001d011086_P005 Maize cytosol 79.92 55.97
GSMUA_Achr2P16160_001 Banana cytosol 79.92 55.97
GSMUA_Achr10P... Banana cytosol 79.92 55.97
VIT_12s0178g00200.t01 Wine grape cytosol 79.55 55.7
GSMUA_Achr8P02660_001 Banana cytosol 79.55 55.7
GSMUA_Achr6P25350_001 Banana cytosol 79.55 55.7
Bra028615.1-P Field mustard cytosol 79.55 55.7
AT5G09810.1 Thale cress cytosol 79.55 55.7
Zm00001d053177_P004 Maize cytosol 79.55 55.7
GSMUA_Achr7P10410_001 Banana cytosol 79.17 55.44
CDX69885 Canola cytosol 79.17 55.44
KRH59535 Soybean cytosol 79.17 55.44
KRH43389 Soybean cytosol 79.17 55.44
PGSC0003DMT400010174 Potato cytosol 79.17 55.44
PGSC0003DMT400047481 Potato cytosol 79.17 55.44
Zm00001d032480_P002 Maize plasma membrane, plastid 79.17 55.44
CDY21607 Canola cytosol 79.17 55.44
GSMUA_Achr3P02960_001 Banana cytosol 79.17 55.44
Solyc11g005330.1.1 Tomato nucleus 79.17 55.44
Solyc03g078400.2.1 Tomato nucleus, plastid 79.17 55.44
Zm00001d013873_P001 Maize plasma membrane, plastid 79.17 55.44
CDY56544 Canola cytosol 78.79 55.17
KRH64098 Soybean cytosol 78.79 55.17
CDX81140 Canola cytosol 78.79 55.17
Solyc01g104770.2.1 Tomato nucleus 78.79 55.17
Zm00001d033790_P001 Maize cytosol 78.79 55.17
Zm00001d013410_P001 Maize cytosol 78.79 55.17
Bra006033.1-P Field mustard cytosol 78.41 54.91
Zm00001d035722_P007 Maize plasma membrane 79.92 54.81
GSMUA_Achr11P... Banana cytosol 78.03 54.64
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 76.52 53.58
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 76.52 53.58
Zm00001d034761_P002 Maize cytosol 79.55 53.57
Solyc04g071260.2.1 Tomato plastid 75.76 53.05
AT1G49240.1 Thale cress cytosol 75.76 53.05
CDY40061 Canola cytosol 70.83 52.97
CDX85794 Canola cytosol 70.83 52.97
AT3G18780.3 Thale cress cytosol 75.38 52.79
CDX92272 Canola cytosol 75.38 52.79
CDX95498 Canola cytosol 75.38 52.79
CDY18545 Canola cytosol 75.38 52.79
CDY61982 Canola cytosol 75.38 52.79
CDY31972 Canola cytosol 70.45 52.69
Bra009081.1-P Field mustard cytosol 70.45 52.69
CDY30296 Canola cytosol 70.45 52.69
CDX82326 Canola cytosol 75.0 52.52
Bra037560.1-P Field mustard cytoskeleton, cytosol 69.7 52.12
GSMUA_Achr6P34320_001 Banana cytosol 45.45 49.18
CDX99315 Canola cytosol 58.71 47.99
Bra022356.1-P Field mustard cytosol 57.95 47.37
Zm00001d011087_P001 Maize plastid 79.92 46.48
GSMUA_Achr10P... Banana cytosol 47.73 45.82
VIT_04s0044g00580.t01 Wine grape extracellular 79.17 45.43
PGSC0003DMT400088088 Potato cytosol 33.33 45.36
Zm00001d008746_P001 Maize cytosol 45.08 43.27
PGSC0003DMT400022205 Potato cytosol 54.92 39.62
PGSC0003DMT400022210 Potato cytosol 54.92 39.4
PGSC0003DMT400074882 Potato cytosol 53.79 38.38
PGSC0003DMT400087294 Potato mitochondrion 38.64 37.23
PGSC0003DMT400074887 Potato cytosol 51.89 37.03
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 78.79 35.25
PGSC0003DMT400076501 Potato cytosol 23.48 31.0
Zm00001d022558_P001 Maize cytosol 39.77 26.99
Zm00001d034421_P004 Maize plastid 46.21 26.07
Zm00001d017106_P001 Maize cytosol 34.09 20.79
Zm00001d008652_P001 Maize endoplasmic reticulum, plastid 17.8 20.35
Zm00001d027326_P001 Maize cytosol, extracellular, nucleus 33.33 19.86
Zm00001d049629_P002 Maize nucleus 26.89 19.29
Zm00001d050981_P001 Maize cytosol 33.33 19.17
Zm00001d014112_P003 Maize cytosol 28.03 17.92
Zm00001d024059_P002 Maize cytosol 27.27 16.74
Protein Annotations
EnsemblPlants:Zm00001d007792_P001EnsemblPlants:Zm00001d007792_T001EnsemblPlantsGene:Zm00001d007792Gene3D:3.30.420.40Gene3D:3.90.640.10InterPro:Actin
InterPro:Actin_CSPANTHER:PTHR11937PANTHER:PTHR11937:SF205PFAM:PF00022PRINTS:PR00190ProteinID:ONM27596.1
ScanProsite:PS00406SMART:SM00268SUPFAM:SSF53067UniParc:UPI0008424978UniProt:A0A1D6F8W3MapMan:20.2.1
Description
Actin-7
Coordinates
chr2:-:239794663..239796426
Molecular Weight (calculated)
29869.9 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.196
Length
264 amino acids
Sequence
(BLAST)
001: MSSFMDSPIV HDIDLVSLVT THRELSFLAL KTYRVCHTGV MVGMGQKDAY VGDEAQSKRG ILILKYPIEH GIVGNWDGME KIWHHIFYNE LRVEPEEHPI
101: PLTEAPLNPK ENREKMTQIM FETFNCPAMY VAIQAVLSLY ASGRTTGIVL DSGDGVSHTV PIYEGYTLPH AILRLDLAGH DLTDNLMKIL TERGYSFTMT
201: VDREIVSDIK EKLVYVALDY EQELETARTS SSVEKSYEMP DGQMWISKEG YDESGPGIVH MKCF
Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.